Gene Avin_46650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46650 
Symbolgph 
ID7763528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4734777 
End bp4735478 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content74% 
IMG OID643807509 
Productphosphoglycolate phosphatase 
Protein accessionYP_002801745 
Protein GI226946672 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCCCC TGCACGCGCT GTTCGACGGG CGCCTGCCGA AACTGGCGAT GTTCGACCTC 
GACGGCACCC TGGTGGACTC GGTGCCGGAC CTGGCGGCGG CGGTCGACCG CATGCTCGTC
CGGCTCGGCC GGGCGCCGGC CGGTGTGGAA CGGGTGCGCC TGTGGGTCGG CAACGGCGCG
CGGGTGCTGG TGCGCCGCGC CCTGGCCGGC GACCTCGACC ACCAGGGCGT GGACGCCGCC
GAGGCCGAGG CGGCGCTGGC GCTGTTCATG GACGCCTACG CCGACAGCCA CGGGCTGACC
CGCGTCTATC CCGGCGTGCC GGAAACCCTC GACTGGCTGC GCGAGCGCGA GGTGGCCCTC
GCCCTGATCA CCAACAAGCC GTCGCGCTTT TTGCCCGAGC TGCTGGCCGA CAAGGGGCTG
GACGGCTACT TCCGCTGGAT CGTCGGCGGC GACACCCTGC CGCAGCAGAA GCCCGATCCG
GCGGCGCTGT TCTGGGTGAT GGCGCAGGCC GGCGTGCTGG CGGAAGAAGC ACTGTTCGTC
GGCGACTCGC GCAACGACGT GCTCGCCGCC CGGGCGGCGG GCGTCGCCTG CGTGGCGCTG
TCCTACGGCT ATAACCACGG CCGGCCGATC GCCGAGGAGG GGCCGGCGCT GGTGCTCGAC
GCGCTGTCCG CGCTGGTTGA TCCGACACCG GGGCTGCGCT AG
 
Protein sequence
MTPLHALFDG RLPKLAMFDL DGTLVDSVPD LAAAVDRMLV RLGRAPAGVE RVRLWVGNGA 
RVLVRRALAG DLDHQGVDAA EAEAALALFM DAYADSHGLT RVYPGVPETL DWLREREVAL
ALITNKPSRF LPELLADKGL DGYFRWIVGG DTLPQQKPDP AALFWVMAQA GVLAEEALFV
GDSRNDVLAA RAAGVACVAL SYGYNHGRPI AEEGPALVLD ALSALVDPTP GLR