Gene Avin_46220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46220 
SymbolpncA 
ID7763487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp4698073 
End bp4698696 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID643807469 
Productnicotinamidase 
Protein accessionYP_002801705 
Protein GI226946632 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.790768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCC TGCCGCCCAT CGGCGAGAAC GACCTGCTGC TGGTGATCGA CCTGCAGAAC 
GATTTCTGCG CCGGCGGCGC CCTGACCGTG CCGGGCGCCG ACGAAGTGGT GCCGACGATC 
AACCGCCTGG CCGAAGACTT CGCCCACGTG GCGCTGACCC AGGACTGGCA CCCGCCGGGC 
CACCGGAGCT TCGCCAGCAG CCATCCGGGG CGCCGGCCGT TCGAGAGCGT CCGGCTGGAC 
TACGGCGAGC AGACCCTGTG GCCCGACCAC TGCGTGCAGA ACAGCCACGG CGCCGAACTC 
CACCCCGCGC TGGACATCCC CCATGCCGAG CTGATCCTGC GCAAAGGCTA CCGCGCCGAG 
GTCGACTCCT ACTCGGCGTT CCACGAGAAC GACCGCTGCA CGCCCACCGG CCTGGCCGGC 
TACCTGCGTG AACGGGGCCT GCGCCGGCTG TTCCTCGCCG GCCTGGCCAC CGACTACTGC 
GTGCACTACA CCGCGCTGGA CGCGCGCCTG GCGGGCTTCG AGACGCTGCT GCTGGCGCAG 
GCCTGCCGCG CCATCGACCG CGACGGCTCC CTCGCCGCGG CGCTGCAGGC GATGCGCGCG 
GCCGGGGTGA AGATCCTCGA CTAG
 
Protein sequence
MKRLPPIGEN DLLLVIDLQN DFCAGGALTV PGADEVVPTI NRLAEDFAHV ALTQDWHPPG 
HRSFASSHPG RRPFESVRLD YGEQTLWPDH CVQNSHGAEL HPALDIPHAE LILRKGYRAE 
VDSYSAFHEN DRCTPTGLAG YLRERGLRRL FLAGLATDYC VHYTALDARL AGFETLLLAQ 
ACRAIDRDGS LAAALQAMRA AGVKILD