Gene Avin_46190 details

Gene Information

• Locus tag: Avin_46190
• Symbol: cadR
• ID: 7763484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4695453
• End bp: 4695911
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643807466
• Product: cadmium responsive transcriptional regulator, merR family
• Protein accession: YP_002801702
• Protein GI: 226946629
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.719382
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAATCG GGGAGCTGGC GAAAATCACC GGAACGCCGG TGGAAACCAT CCGCTACTAC 
GAGCGCGAGG GCCTGCTGGC CGCGCCGGCC CGCACGATGG GCAACTTCCG CATCTACACG 
GGCGCGCATG TCGAAAGGCT GTCGTTCATC CGCCGTTGCC GCCTGCTGGA CATGACCCAC 
GAAGAGATCC GGGCGCTGCT CCGTTTCAAG GACGATCCCC GCCAGGACTG CGCCGATGTG 
AACAGCCTCC TGGATGCGCA CATCGCTCAC GTGTCCGCGC GCATCCACGA ACTCCGCCAG 
CTCGAGGAAC AACTCAAACG CCTGCGCGAG TGCTGCAGCG AGCCGAGCGA GGCCGCGCGC 
TGCGGCATCC TGCGCGAGCT GTCGCAGCCG CTGGCGGAGG ACCGGACGCG GGGGAACAAT 
CATGTGACCG GCTCGCATCC GGGCAAGCTC GCTCAATGA 

 

Protein sequence

MKIGELAKIT GTPVETIRYY EREGLLAAPA RTMGNFRIYT GAHVERLSFI RRCRLLDMTH 
EEIRALLRFK DDPRQDCADV NSLLDAHIAH VSARIHELRQ LEEQLKRLRE CCSEPSEAAR 
CGILRELSQP LAEDRTRGNN HVTGSHPGKL AQ