| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_46110 |
|---|
| Symbol | trpC |
|---|
| ID | 7763476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4687260 |
|---|
| End bp | 4688060 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643807459 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_002801695 |
|---|
| Protein GI | 226946622 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTGC CTACCGTTCT GGAAAAGATC ATTGCACGCA AGCTCGAGGA GGTCGCCGAG
CGCAGCGCCC GTGTCCCGCT GGCCGAGGTC GAGGCACTGG CCCGTTCCGC CAGCGCCCCG
CGCGGCTTCG CTGAAGCCCT GCGGGCGCAG GTCGAGAGCA AGGAGCCGGC AGTGATCGCC
GAGGTCAAGA AGGCTTCGCC GAGCAAGGGT GTGCTGCGCG AGCACTTCGT CCCCGCGGAG
ATCGCCAAGA GTTACGAGGA GGGCGGGGCG ACCTGCCTGT CGGTGCTGAC CGATGTGGAT
TTCTTTCAAG GCAGCGACGC CTATCTGCAG GAAGCCCGTG CGGCCTGCGG TCTGCCGGTG
ATCCGCAAGG ACTTTCTCAT CGATCCCTAT CAGGTGGTCG AGGCCCGCGC GCTGGGCGCC
GATTGCGTGT TGCTGATCGT CGCCGCGCTG GGCGACGCGC AGATGCTGGA ACTGGCCGCC
ACCGCGAAGG AGGTCGGTCT CGACGTGCTG GTGGAGGTGC ATGACGGCAC CGAGCTGGAA
CGGGCACTGC AACTGGAGAC GCCGTTGATC GGCATCAACA ACCGCAACCT GCATACCTTC
GAGGTAAGTC TGGAAACCAC CCTCGACCTG TTGCCGAAGG TGCCGCGCGA GCGTCTGGTG
GTCACCGAGA GCGGCATACT CAACCGCGCT GATGTCGAGC TGATGGAAGT CAGCGGGGTA
TATGCCTTCC TCGTCGGCGA GGCGTTCATG CGGGCCGAGA AGCCGGGCGC CGAGCTGCGC
CGGCTGTTCT TCCCCAACTG A
|
|---|
| Protein sequence | MSLPTVLEKI IARKLEEVAE RSARVPLAEV EALARSASAP RGFAEALRAQ VESKEPAVIA
EVKKASPSKG VLREHFVPAE IAKSYEEGGA TCLSVLTDVD FFQGSDAYLQ EARAACGLPV
IRKDFLIDPY QVVEARALGA DCVLLIVAAL GDAQMLELAA TAKEVGLDVL VEVHDGTELE
RALQLETPLI GINNRNLHTF EVSLETTLDL LPKVPRERLV VTESGILNRA DVELMEVSGV
YAFLVGEAFM RAEKPGAELR RLFFPN
|
|---|
| |