Gene Avin_46000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46000 
Symbol 
ID7763465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4677085 
End bp4678527 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content58% 
IMG OID643807448 
Productmetallopeptidase 
Protein accessionYP_002801684 
Protein GI226946611 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.064748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCAA AAGACACCAA AGCCCTGCTC TACCCCAAAA GCCATATTCT GGCTGCAGGC 
GGTGTAGCAG CGCTGTTAAG CCTGGCCCTG CTGGTGTTTC CGTCACGCGA GGTCGAGGCA
AAGAAGCCCT TCATCCATCC GAAGATGGAA AATGCCTCAA CTCAGATCGA AGAAACAGAC
GACCAAAAGC CAGAACTGCT GCCTATCGAC GAGGAAGCAG AACCGCCTTT TGTCGTGCTC
GAAAGCTCCA CGGACAGCCA GCCGCCCCCT GCGGAGCAAC CGGCCCAGCA GGCAGAAGCA
GAAGCCCCCG CCGCAGTGGC CGCGACGCCA TCCCTGCCTG CAACGCCCAC AGTGGTGACC
TCTGGCAAGG GCGATACCCT TTCCACAGTT TTTGCCAAGG CAGGGGTTCC TGCATCCATC
CTGCAGGAAA TCCTTCATGA CAAGGAGGCG GCCAAATACT TGGGCCGCAT CAAAACCGGC
CAAAAATTCG AATTCACCTT CTCCGCCGAT GGCGAGCTGC AGACCCTGAG CGCGAATCTG
GACAAACTGG AAAGCGTCGA AATCAGCAAG TCTGTCCAAG GGTTTTCCGT CAAGCACGAG
ATCGCCAAAC CCGAGATGCG GACTGTCTAC GCCCGTGGCG TGATCGGCAG CTCCTTTTCC
CTGGCGGCCA AGAAGGCCGG TCTGAGCCAC GGTCAGACCG TGTCGCTGTC GAAGATCTTC
GCCTATGACA TAGATTTCGC TCAGGACATT CGTCGTGGCG ATGAGTTTGA AGTGATCTAT
GAAGAGAAGC GTCTCGGCAG CAAGCGCCTG CATCAGGGCA AGATTCTCGC CGCACGCTTC
ACCAATCGAG GCAAAACCTA CACGGCCGTA CGCTATACCA ACAAGCAGGG CGCAACCCAC
TACTACACCG TTGACGGCAA CAGCATGCGC AAGGCCTTCA TCCGAACTCC CGTGGACTTT
GCCCGCATCA GCTCGCGTTT TTCCAATGGC CGCCGCCACC CGATTCTCAA CAAGATCCGC
GCCCACAAAG GCGTGGATTA CGCCGCACCA CGCGGCACAC CGATCCGCGC AACCGGCGAT
GGAAAGGTGA CCCTCGCCGG CCGCAAGGGA GGCTATGGCA ATACCGTGAT CATCGAGCAC
GGCAACAACC AGCAGACCCT GTACGCGCAC ATGCAAGGCT TTGCCAAAGG GATTCGCACG
GGCAGCAGCG TGAAACAGGG ACAGATCATT GGCTACATCG GAACCACGGG ACTATCGACC
GGCCCCCATC TGCACTATGA ATTCCAGATC AATGGTACCC ACGTCGATCC CTTGTCGCAG
AAGCTGACGA TGGCCAACCC GATCAGCCGG GGCGAAAAGC AGCGCTTCCT GCAGCAGACC
CAGCCGTTGA TGGCCCGAAT GAACAAGGAA AAGGCCACGA TGCTGGCCAT GGACAAGCGC
TGA
 
Protein sequence
MTPKDTKALL YPKSHILAAG GVAALLSLAL LVFPSREVEA KKPFIHPKME NASTQIEETD 
DQKPELLPID EEAEPPFVVL ESSTDSQPPP AEQPAQQAEA EAPAAVAATP SLPATPTVVT
SGKGDTLSTV FAKAGVPASI LQEILHDKEA AKYLGRIKTG QKFEFTFSAD GELQTLSANL
DKLESVEISK SVQGFSVKHE IAKPEMRTVY ARGVIGSSFS LAAKKAGLSH GQTVSLSKIF
AYDIDFAQDI RRGDEFEVIY EEKRLGSKRL HQGKILAARF TNRGKTYTAV RYTNKQGATH
YYTVDGNSMR KAFIRTPVDF ARISSRFSNG RRHPILNKIR AHKGVDYAAP RGTPIRATGD
GKVTLAGRKG GYGNTVIIEH GNNQQTLYAH MQGFAKGIRT GSSVKQGQII GYIGTTGLST
GPHLHYEFQI NGTHVDPLSQ KLTMANPISR GEKQRFLQQT QPLMARMNKE KATMLAMDKR