Gene Avin_45990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45990 
SymboltyrS 
ID7764101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4675489 
End bp4676688 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content55% 
IMG OID643807447 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_002801683 
Protein GI226946610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000021558 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTCGA TTGAAGAGCA GTTGGCGCTG ATCAAGCGTG GTGCGGAGGA AGTCTTGGTC 
GAGGCTGATC TGGTCGAGAA GCTGAAAAGT GGCCAGCCTC TGCGAGTCAA GGCCGGTTTT
GATCCCACTG CTCCAGATCT TCATCTCGGA CATACCGTAC TCATCAACAA GCTGCGCCAA
TTTCAGGACT TGGGACACCA AGTGATTTTC CTTGTGGGCG ATTTCACCGG CATGATTGGT
GATCCCACTG GCAAAAGCGC AACCCGACCT CCTTTAACTC GTGATCAAGT GCTGGAAAAC
GCTGAAACCT ACAAGGCTCA GGTTTTCAAG ATCCTCGATC CGGCCAAGAC GGAGGTGGTT
TTCAACTCTG CTTGGATCGA GCAATTGACA CCGGCCGACT TCGTCCGGCT CACCTCCCAT
TGCACGGTTG CTCGCATGCT CGAGCGCGAC GATTTCAGCA AGCGCTATGC TGCTAATCAG
TCGATAGCCC TCCATGAGTT TCTCTACCCA TTGATGCAAG GATACGACTC GGTTGCCTTG
CGGGCCGATG TCGAGCTGGG GGGGACGGAC CAGAAGTTCA ATCTGTTGAT GGGGCGCGAG
CTGCAGCGTG TTTATGGCCA GAAATCCCAG TGCATAGTCA CCATGCCTCT GCTTGAAGGC
TTGGATGGCG TGAAGAAAAT GTCCAAGTCA CTGGGTAATT ATGTTGGCAT CCAGGAGCCG
CCGGGAGTCA TGTACGGCAA GCTGGTGTCC ATCCCTGATT CGCTGATGTG GCGATACTTC
GAACTCCTGA GCTTCCGTTC GATGGAGGAG ATCGATGCTT TCCGGTCCGA GGTCGATCGA
GGGGCCAATC CTCGCGACAT CAAGATCAAG CTGGCCGAGG AGATCGTGAC GCGCTTCCAT
GGAGAAGTAG CGGCCGCCAA TGCGCACCGT TCGGCCGGGA ATCGCATGAA GGATGGCGAG
TTGCCGGAGA GTTTGCCCGA AATCCAGCTG CTTTCCACAG AAGATATGCC CATCGCTGCC
GTTTTGAATA AGGCAGGCTT GGTCAAGAAC GCTGCTGCAG CGCGTGATTT GCTCTCCTCT
GGAGGGGTTC GAGTGGATGG TGCGGTGGTT GATCGTGGCT TCCTGTTTCA ACTTGGTTCA
ACCCATGTCT GTCAGGCAGG CAAGAAGTCT TTTGCCAAAA TTATCTTGAA GGCGGAATAA
 
Protein sequence
MRSIEEQLAL IKRGAEEVLV EADLVEKLKS GQPLRVKAGF DPTAPDLHLG HTVLINKLRQ 
FQDLGHQVIF LVGDFTGMIG DPTGKSATRP PLTRDQVLEN AETYKAQVFK ILDPAKTEVV
FNSAWIEQLT PADFVRLTSH CTVARMLERD DFSKRYAANQ SIALHEFLYP LMQGYDSVAL
RADVELGGTD QKFNLLMGRE LQRVYGQKSQ CIVTMPLLEG LDGVKKMSKS LGNYVGIQEP
PGVMYGKLVS IPDSLMWRYF ELLSFRSMEE IDAFRSEVDR GANPRDIKIK LAEEIVTRFH
GEVAAANAHR SAGNRMKDGE LPESLPEIQL LSTEDMPIAA VLNKAGLVKN AAAARDLLSS
GGVRVDGAVV DRGFLFQLGS THVCQAGKKS FAKIILKAE