Gene Avin_45960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45960 
Symbol 
ID7763462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4668294 
End bp4669487 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID643807440 
ProductTransposase, IS4 
Protein accessionYP_002801681 
Protein GI226946608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCG TCCAATTCTT GCACGCCGCC TTCGCCGAGG CACTCCCCAC GATCCATGCC 
CGCCGTCTCG AAGCCTTGAT GGCGGCGGTA GCCGCCCTGC TGCAGGGCCG CCGCCTGACC
CTGACCGCAC TGGGGCGCTC TCTGCCCGGC TCTGCCTGGC CCAGGCAGGC GATCAAGCGG
ATCGACCGCC TGCTCGGCAA CCGGCAGCTT CAAGCCGAAC GTGGCTTGTT CTATTGGGTC
ATGCTCCGCG CCCTGCTGGG CTCGCTCAGG CATCCGTTGA TCCTGGTGGA CTGGTCGCCG
ATCGATGCCA CCGGCAACCT GTTCCTGCTG CGAGCGTCGA TGCCGCTGGC CGGGCGCTCG
TTGCCGGTCT GCGAAGTCGT CCCCCCGCGC GAAGGCTGCC CGCGTTGCCA GCGGCGCCTG
CTCGAGGCCC TGGCGGCGAT GCTGCCGGCC GACTGCACGC CCATCCTGGT CACCGATGCG
GGCTTCCGGC GGCCCTGGTT CCAGGCCGTC GAGGCGCAGG GCTGGCATTA CGTCGGCCGC
GTGCGCAACC GCGACCTGTG CCGGCTCGGC GAGCAGTCGT GGCAGCCGGT GAAAAGCCTG
TATGCCCTGG CCTCGGCGTC GCCGAAACGG CTCGGTCGTC TCGAGACGAC GCGCTCGGCG
CCCTGGTCCA CCCAGCTCTG CGCGGTGAAG CATCCATCGC GGGGGCGCAA GCACCGGCGC
GTCACCGGAC GCGTGGCCCG GGACAAACGC AGCCGGCAGA ACGCCCGGCG CGAAAGCGAG
CCCTGGCTGC TGGCCAGCAA CCTGCCCGAG GCGCAGTGGA GTGCCGCGCA GATCGTGGCG
ATCTACAGGC GGCGCAGGCA GGTCGAGGAA GGCTTCCGCG ACCTGAAGAG CCATCGGCTG
GGGATCGGTC TGGGGCTGCG TCGCAGCCGC TGCCCGCGGC GCATCGAGAT CCTGCTGCTG
ATCGCCGTGC TGGCCAACTA CGCGCTGTGC CTACTGGGCC TGCAGGCGCG GGAGGCGGGG
CACGAACGGC ATTTCCAGAG CAACAGCCTC AAGGACCGGC ACGTGTTGTC GCTGTGGCGG
CTGGGGCTGG AGTATGCACG CCGTTACGCG GGAGACCTTT CCCGGGAGAA GCTACGGAAT
CTGGAGCTGG CCCTGCGGCG GGAGGTCCAC CGGCAAGCGC TGGAGCTGGG GTGA
 
Protein sequence
MQTVQFLHAA FAEALPTIHA RRLEALMAAV AALLQGRRLT LTALGRSLPG SAWPRQAIKR 
IDRLLGNRQL QAERGLFYWV MLRALLGSLR HPLILVDWSP IDATGNLFLL RASMPLAGRS
LPVCEVVPPR EGCPRCQRRL LEALAAMLPA DCTPILVTDA GFRRPWFQAV EAQGWHYVGR
VRNRDLCRLG EQSWQPVKSL YALASASPKR LGRLETTRSA PWSTQLCAVK HPSRGRKHRR
VTGRVARDKR SRQNARRESE PWLLASNLPE AQWSAAQIVA IYRRRRQVEE GFRDLKSHRL
GIGLGLRRSR CPRRIEILLL IAVLANYALC LLGLQAREAG HERHFQSNSL KDRHVLSLWR
LGLEYARRYA GDLSREKLRN LELALRREVH RQALELG