Gene Avin_45830 details

Gene Information

• Locus tag: Avin_45830
• Symbol: typA
• ID: 7763450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4653485
• End bp: 4655305
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643807428
• Product: small GTP-binding protein TypA
• Protein accession: YP_002801669
• Protein GI: 226946596
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAAA AACTGCGCAA CATCGCCATC ATCGCCCACG TCGACCATGG CAAGACCACC 
CTCGTCGACA AGCTGCTCAA GCTCTCCGGC ACCCTGGATC GCAAGGAGGC CGAGAACGAG 
CGCGTGATGG ACTCCAACGA CCAGGAAAAG GAGCGTGGCA TCACCATCCT GGCCAAGAAC 
ACCGCCATCC AGTGGAACGG CTACCGCATC AACATCGTCG ACACCCCCGG CCACGCCGAC 
TTCGGCGGCG AGGTGGAGCG CGTGATGAGC ATGGTGGACT CCGTGCTGCT GGTGGTCGAC 
GCCCAGGACG GCCCCATGCC GCAGACCCGT TTCGTGACCC AGAAGGCGTT CAAGGCCGGC 
CTGCGTCCGA TCGTGGTGGT GAACAAGGTC GACCGCCCCG GCGCGCGTCC CGACTGGGTG 
ATCGACCAGA TCTTCGACCT GTTCGACAAC CTCGGCGCCA CCGACGAGCA GCTCGACTTC 
CCGATCGTCT ACGCCAGCGC CCTGAACGGC ATCGCCGGGC TCGACCACGA GAAGATGGAC 
GACAACATGG ATGCGCTGTT CCAGGCCATC ATCGACCACG TGCCGGCCCC GGTGGTGGAC 
GTCGAGGGCC CGTTCCAGAT GCAGATCTCC CAACTGGACT ACAACAGCTT CCTCGGCGTG 
ATCGGCATCG GCCGCATCGC CCGCGGCACC GTCAAGGCCA ACAGTCCGGT AGCCGCCGTC 
GGCGCCGACG GCAAGAAGCG CAACGGCCGC ATCCTGAAGA TCATGGGCCA CCACGGGCTG 
CAGCGCGTCG AGGTGCCGGA AGCCACCGCC GGCGATATCG TCTGCGTCAG CGGCATGGAG 
GAGCTGTACA TCTCCGATAC CCTGTGCGAC CCGCAGAACG TCGAGGCCCT GCCGCCTTTG 
ACCGTCGACC AGCCGACCGT GAGCATGACC TTCCAGGTCA ACGACTCGCC GTTCGCCGGC 
AAGGAAGGCA AGTTCGTCAC CAGCCGCAAC ATCAAGGACC GCCTGGACAA GGAACTGCTG 
CACAACGTGG CGCTGCGCGT CGAGCAGGGC GACAGCCCGG AGAAGTTCAA GGTCTCCGGC 
CGTGGCGAGC TGCATCTGTC CGTACTGATC GAGACCATGC GCCGCGAAGG CTTCGAACTG 
GCCGTGGGCC GCCCGGAAGT GGTGATCATC GAGAACGAGG CCGGCGAGAA GCAGGAGCCC 
TACGAGAGCG TCACCATCGA CATCGAGGAG CAGCACCAGG GCCCGGTGAT GGAGCAGATG 
GGGCTGCGCA AGGGCGACCT GACCAACATG ATCCCGGACG GCAAGGGCCG CATCCGTCTC 
GAGTACACCA TCCCGGCGCG AGGCCTGATC GGCTTCCGCA ACGCCTTCCT GACCATGACC 
TCGGGTACCG GCATCCTCAC CAGCACCTTC AGCCACTACG GCCCGATCAA GGCCGGCGAA 
GTGGCCCACC GCCAGAACGG CGTGCTGGTG TCCATGGCCA CCGGCACCGC GCTGACCTAC 
TCGCTGGAAA CCCTGCAGGA CCGCGGCAAG CTGTTCCTGT CGCCCGGCGA GGAGGTCTAC 
GAAGGCCAGT TGGCCGGCAT CCACAGCCGC GATAACGACC TGGTGATCAA CCCGACCAAG 
GCCAAGAAGC TCGACAACAT GCGCGCTTCC GGCAAGGACG AGACCATCCA GTTGACCCCG 
GCGCTGAAGT TCACCCTGGA GCAGGCGCTG GAGTTCATCG ACGAGGATGA ACTGGTGGAG 
GTGACGCCGA AGTCGATCCG CCTGCGCAAG AAGCTGCTCA ACGAGAACGA CCGTAAACGC 
TACGAGCGCA GCAAGGTCTG A 

 

Protein sequence

MIEKLRNIAI IAHVDHGKTT LVDKLLKLSG TLDRKEAENE RVMDSNDQEK ERGITILAKN 
TAIQWNGYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AQDGPMPQTR FVTQKAFKAG 
LRPIVVVNKV DRPGARPDWV IDQIFDLFDN LGATDEQLDF PIVYASALNG IAGLDHEKMD 
DNMDALFQAI IDHVPAPVVD VEGPFQMQIS QLDYNSFLGV IGIGRIARGT VKANSPVAAV 
GADGKKRNGR ILKIMGHHGL QRVEVPEATA GDIVCVSGME ELYISDTLCD PQNVEALPPL 
TVDQPTVSMT FQVNDSPFAG KEGKFVTSRN IKDRLDKELL HNVALRVEQG DSPEKFKVSG 
RGELHLSVLI ETMRREGFEL AVGRPEVVII ENEAGEKQEP YESVTIDIEE QHQGPVMEQM 
GLRKGDLTNM IPDGKGRIRL EYTIPARGLI GFRNAFLTMT SGTGILTSTF SHYGPIKAGE 
VAHRQNGVLV SMATGTALTY SLETLQDRGK LFLSPGEEVY EGQLAGIHSR DNDLVINPTK 
AKKLDNMRAS GKDETIQLTP ALKFTLEQAL EFIDEDELVE VTPKSIRLRK KLLNENDRKR 
YERSKV