Gene Avin_45720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45720 
SymbolglpR 
ID7763439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4641019 
End bp4641774 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content66% 
IMG OID643807418 
Productglycerol-3-phosphate regulon repressor protein GlpR 
Protein accessionYP_002801659 
Protein GI226946586 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTAG CGCCCCGCCA ACAGAACATC CTCGACCTAG TCCGCGAACG CGGCTACGTC 
AGCATCGAAG AACTGGCCCA CTCCTTCACT GTCACGCCGC AGACCATCCG CCGAGACATC
AACCAGCTCG CCGAACAGGG GCTGCTGCGC CGCTATCACG GCGGGGCCGC CTACGACTCC
AGCGTGGAGA ACACCGCCTA CGCCATGCGT GCCGGCCAGA TGCACGACGA GAAACGGCGC
ATCGCCGAAG CCATCGCCGC GGTCGTGCCG GATCACGCCT CGCTGTTCAT CAACATCGGC
ACCACCACCC AGGCGATCGC CCGCGCCCTG CTCGGCCATC AGGCGCTGAA GGTGATCACC
AACGACCTGC ACGTGGCCGG CATTCTCAGC ACCAAGGAGA GCTTCGAGGT CCTGGTCGCC
GGCGGCAAGG TGCGCAACGA TGGCGGCATC GTCGGCCAGG CCACGGTGGA TTTCATCCAG
CAATTCAAGG TCGACTACGC CCTGGTCGGC ATCAGCGGCA TCGACGAGGA CGGCAGCCTG
CTGGATTTCG ACTTCCGCGA AGTGCGCGTC TCCCGGGCCA TCCTCGACAA CGCGCGCCAG
GTGTTCCTTG CCGCCGACTC GAGCAAGTTC GGGCGCAACG CGATGGTCCG CCTCGGCGCC
ATCACCCAGG TCGACCGCGT TTTCACCGAC GCCCAGCCGG CTTCGCGGCT GGTCCAACTG
CTGGCCGAGC ACAAGGTCAG GCTGGAAGTC GTCTGA
 
Protein sequence
MSLAPRQQNI LDLVRERGYV SIEELAHSFT VTPQTIRRDI NQLAEQGLLR RYHGGAAYDS 
SVENTAYAMR AGQMHDEKRR IAEAIAAVVP DHASLFINIG TTTQAIARAL LGHQALKVIT
NDLHVAGILS TKESFEVLVA GGKVRNDGGI VGQATVDFIQ QFKVDYALVG ISGIDEDGSL
LDFDFREVRV SRAILDNARQ VFLAADSSKF GRNAMVRLGA ITQVDRVFTD AQPASRLVQL
LAEHKVRLEV V