Gene Avin_45380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45380 
SymbolhslV 
ID7763406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4607763 
End bp4608305 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID643807386 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_002801627 
Protein GI226946554 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.479981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGACCA CTCCCTTGAC CACCATCGTT TCAGTCCGCC GCCAAGGCAA AGTCGTCATG 
GGCGGCGACG GCCAGGTTTC CCTCGGCAAC ACCGTGATGA AGGGCAACGC GAAGAAAGTC
CGCCGCCTCT ATCACGGCCA GGTGCTGGCC GGCTTCGCCG GCGCCACGGC GGACGCCTTC
ACCCTCTTCG AACGTTTCGA GGGCCAGTTG GAGAAACACC AGGGCCACCT GGTCCGCGCC
GCCGTCGAAC TGGCCAAGGA CTGGCGTACC GAGCGCTCGC TGAGCCGCCT GGAGGCCATG
CTGGCGGTGG CCAACAAGGA CGCCTCGCTG ATCATCACCG GCAACGGCGA CGTGGTCGAA
CCCGAGGAAG GCCTGATCGC CATGGGCTCG GGCGGCCCCT ACGCGCAGGC CGCGGCGAAA
GCGCTGCTGC TGCATACCGG TCTGTCGGCC CGCGAGGTCG CCGAAACCGC CCTGAACATC
GCCGGCAGCA TCTGCGTCTT CACCAACCAG AACCTGACCA TCGAGGAATT GGACCTCGAC
TGA
 
Protein sequence
METTPLTTIV SVRRQGKVVM GGDGQVSLGN TVMKGNAKKV RRLYHGQVLA GFAGATADAF 
TLFERFEGQL EKHQGHLVRA AVELAKDWRT ERSLSRLEAM LAVANKDASL IITGNGDVVE
PEEGLIAMGS GGPYAQAAAK ALLLHTGLSA REVAETALNI AGSICVFTNQ NLTIEELDLD