| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_45350 |
|---|
| Symbol | priA |
|---|
| ID | 7763403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4602756 |
|---|
| End bp | 4604975 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643807383 |
|---|
| Product | primosome assembly protein PriA |
|---|
| Protein accession | YP_002801624 |
|---|
| Protein GI | 226946551 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.746979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCCC CGATCCTCCG CCTCGCCCTG CCCTCGCCGC TGCGTCGCCT GTTCGACTAC
CGCGCCCCGC CCGGCGTGCC GACCGCTCGC CTGCGGCCGG GGGTACGCCT GCGCGTGCCG
TTCGGCCGGC GCGAAGTGGT CGGCGTACTG GTCGAACTGA GCGAGCACAG CGAAGTGCCG
CCCGACAAGC TGAAGGCCGC CCTCGAACTG CTCGATCCCT GTTCGCCACT GCCGCCGAGC
CTGCTCAGGC TGTGCCGGTG GACGGCCCAC TACTACCAGC ACAGCCTCGG CGACACCTTC
GGCTGGGCTT TGCCGGCGCT GCTGCGCCAG GGCGAACCGG CCGAGCGGCG CCAGGAACGC
TGGTGGCACC TGGCCGCAGA CGCACGTCCG GACGATCCGC GCCTGGCCCG CGCACCGCGC
CAGCGCGAGG CACTGCAGAC CCTCGCCCAA CATCCCCATG GCGTGCCCCA GGCCCTGCTC
GGCAAGCTGC GACTAAACAA GGCCAGTCTC GACCTGCTGC TGGCCAAGGG GCTGCTGCGC
ACCGAAATAC GCCACCACGC CCCGCGCGAA CGGCACGGTA GCTGGCTGCT CCAGGCCGAA
CTGCCGCTGA ACGACGAACA GCGCGAGGCC GTCGAGGCAG TGCGCGCCGG CTTCGGCGGC
TTCAACGCCT TTCTGCTCGC CGGCGTCACC GGCAGCGGCA AGACCGAGGT CTACCTGCAA
CTGATCCACC AGGTACTAGA GGCCGGCCGG CAGGCGCTGG TGCTGATCCC GGAAATCAAC
CTCGGCCCAC AGACACTGGA ACGATTCACC CGCCGCTTCA ATGCCCGGGT TGCCCTGCTC
CACTCCGGCA TCGGCGACCG CGAACGCCTG GACGCCTGGC TGGCGGCCCG CGACGGCGAG
GCAGACATCG TCATCGGCAC CCGCTCGGCA CTCTTCACCC CGCTCAAGCA TCCCGGCCTG
ATCATCGTCG ACGAGGAGCA CGATGCCTCC TACAAACAGC AGGAAGGCCT GCGTTACCAC
GCTCGCGACC TGGCCGTGGT ACGCGCCCGG CAGGAGGAGA TCCCGGTCCT GCTCGGCTCC
GCCACACCCT CCCTGGAAAG CCTGCACAAC GCCCATGCCG GACGCTACGC CCTGCTCCGG
CTCCGCCAGC GCGCCGGCCA GGCCCGTCCG CCGCGCTTCC TGCGCCTGGA CGTGAAAAGC
CGACCGCTCG ACGCCGGGAT CTCTCCGCCC TTGCAACAGG CCATCGCCCG CACGCTCGCC
GCCGGCCAGC AGGTACTGGT GTTCCTCAAC CGCCGTGGTT TCGCGCCGAC CCTGCTGTGC
CACGACTGCG GCTGGATCGC CCTGTGCCCG CGTTGCGATG CGCGCATGAC CCTGCACCAG
CGCCAGCGCG AACTGCGCTG CCACCATTGC GGCCACGCCG AACGCCAGCC GACCGCCTGC
CCGCAATGCG CCCAGGTCGA CCTGCGGCCG GTCGGCGCCG GCACCGAACG CGCGGAAGAA
CGTCTGGCCA TCCTCTTCCC GGATTATCCG GTGCTGCGCA TCGACCGCGA CAGCACCGCA
CGCAAGGAGG CGCTGCCCAG GCTGCTCGCC ACCATCCACC GCGGCGAGCC CTGCCTGCTG
GTCGGCACCC AGATGATCGC CAAGGGCCAT CATTTTCCGC GCGTCACCCT GGTGGCGATC
CTCGATGCCG ACGGCGGCCT GTTCTCCGCC GACTTTCGCG CCAGCGAACG CATGGCCCAA
CTGATCGTGC AGGTCGCAGG GCGCGCCGGG CGCGCCGAAG AGCCGGGCAC GGTGATCATC
CAGACCCACC TGGCCGACCA CCCGCTGCTG GTCCAGCTCG CCGAACAGGG CTACCTCGCC
TTCGCCGAGC AGGCCCTCGC GGAGCGCCGC GCCGCCGGCC TGCCGCCCTT CGCCCACCTG
GCCCTGCTGC GTGCCGAAGC GCACCGGCCG GGTCAGGCCG AGGGCTTTCT CGAACAGGCC
GCCGACGAGG CCCGGCAACT GCTCGCCGCC CTGCAACTCT CTAGCCTCGA ACTGCTCGGT
CCGGTGCCGG CGCCGATGGA GCGACGCGCC GGCCGCCATC GCGCCCAGTT ACTGCTGCAG
GCCTCCGGCC GCGCACCACT TCACCGCCTG CTCGGGCCCT GGCTGGCGGC CCTCGAACGA
CTGCCGGGCG CCCGCACGGT GCGCTGGTCG CTGGACGTCG ACCCGATCGA CCTGTACTGA
|
|---|
| Protein sequence | MPAPILRLAL PSPLRRLFDY RAPPGVPTAR LRPGVRLRVP FGRREVVGVL VELSEHSEVP
PDKLKAALEL LDPCSPLPPS LLRLCRWTAH YYQHSLGDTF GWALPALLRQ GEPAERRQER
WWHLAADARP DDPRLARAPR QREALQTLAQ HPHGVPQALL GKLRLNKASL DLLLAKGLLR
TEIRHHAPRE RHGSWLLQAE LPLNDEQREA VEAVRAGFGG FNAFLLAGVT GSGKTEVYLQ
LIHQVLEAGR QALVLIPEIN LGPQTLERFT RRFNARVALL HSGIGDRERL DAWLAARDGE
ADIVIGTRSA LFTPLKHPGL IIVDEEHDAS YKQQEGLRYH ARDLAVVRAR QEEIPVLLGS
ATPSLESLHN AHAGRYALLR LRQRAGQARP PRFLRLDVKS RPLDAGISPP LQQAIARTLA
AGQQVLVFLN RRGFAPTLLC HDCGWIALCP RCDARMTLHQ RQRELRCHHC GHAERQPTAC
PQCAQVDLRP VGAGTERAEE RLAILFPDYP VLRIDRDSTA RKEALPRLLA TIHRGEPCLL
VGTQMIAKGH HFPRVTLVAI LDADGGLFSA DFRASERMAQ LIVQVAGRAG RAEEPGTVII
QTHLADHPLL VQLAEQGYLA FAEQALAERR AAGLPPFAHL ALLRAEAHRP GQAEGFLEQA
ADEARQLLAA LQLSSLELLG PVPAPMERRA GRHRAQLLLQ ASGRAPLHRL LGPWLAALER
LPGARTVRWS LDVDPIDLY
|
|---|
| |