Gene Avin_45270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45270 
SymbolpilP 
ID7763395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4593541 
End bp4594065 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID643807375 
ProductPilus assembly protein 
Protein accessionYP_002801616 
Protein GI226946543 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTG CCCACCTGGT CTGCATTGTG GCCCTTGTCG GACTTTCCGG TTGCGATGTC 
GATAATGGAT TTCAGGATTT GCAGACTTAC ATGGATGAAG TGCGCGCACG ACCCAGGGGC
GCGATCGAGC CGTTGCCGGC GTTCCGGCCC TACGAGGCTT TTACCTACGG TGCGGCCGCC
ATGCGCAGCC CGTTCCAAGC GCCGGTGAAG ATCGACCCGG CCAGCCAGCG TAGAGGCTCG
AGGGATATCC GTCCGGACGA AAGCCGCTCC AGGCAGTATC TCGAAAGATT CAACATCGAG
GTCTTCGAGA TGGTCGGCAC GCTCTCCAAC GGAACGGGCA TGCAGGCCCT GGTGCGCGGG
GCGGGCGGTG TCCATCGGGT GAGGGTGGGC GACTACCTGG GTCGCAATCA TGGCCGCGTC
GTCGAGATCG ACGGGGCTTC CGTCGAGGTC GTGGAAATCG TTCCCGACGG CGATGGCGGC
TGGCTGGAGC GCCCGCGCAG TCTCGCCTTG AAGGAGCGCT CGTGA
 
Protein sequence
MKSAHLVCIV ALVGLSGCDV DNGFQDLQTY MDEVRARPRG AIEPLPAFRP YEAFTYGAAA 
MRSPFQAPVK IDPASQRRGS RDIRPDESRS RQYLERFNIE VFEMVGTLSN GTGMQALVRG
AGGVHRVRVG DYLGRNHGRV VEIDGASVEV VEIVPDGDGG WLERPRSLAL KERS