| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_45260 |
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| Symbol | pilQ |
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| ID | 7763394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4591388 |
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| End bp | 4593541 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643807374 |
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| Product | secretion system protein |
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| Protein accession | YP_002801615 |
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| Protein GI | 226946542 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGTT CCGGCATGAA GAAAAGTTCC CGTTCCGCAT TACGGCATCC GTCGATGGAC
AGCACCCTTT CGCGTCTCGG TATTTTGGTC CTGACCGCCC TGCTGTCGCC GGAATTGATG
GCGGCCGATC TCGAGTCCCT GGACGTGGCG GCCCTGCCTG GCGATCGGGT CGAACTCAAG
CTGTCATTCG ACGAGGCCGT GCCGGCGCCA CGTGGCTACA CCATCGACCA GCCGGCCCGG
ATTGCCCTGG ATCTTCCCGG CGTGACCAAC AAGCTGAGGA CCAAGTACCG CGAGTTGGGC
GTCGGCAACG CCCGCAGTGT CACCCTGGTC GAGGCGAGCG GGCGCACCCG GATGATCGTC
AACCTGGCCG CGATGTCGCC CTACAGCACG CGGAGCGAGG GCCATGACCT TTATGTGCTG
ATCGGCGAGT CGGCCACCGT GACCCGGCAG TCCCGCAGTG CCTCGCTCGC GGTCGCGCAG
GCCAAGCCCT ACGTAACGCC AGGCAAGGCG GTTCGGGGCA TCGACTTCCA GCGTGGCGAG
CAGGGCGAAG GCAACGTCAT CATCGACCTG TCGAGCCCGG GCATGAATCC CGACCTCCAG
GAGCAGGGTG GCAAGATCCG CCTGGACTTT CCGGGAACGC AGTTGCCGGA GTCCCTGCGG
GCACGCCTGG ACGTCAAGGA TTTCGCCACC CCCGTGCACT TCGTGAGTGC CTCGAGCCAG
GCCGGCAAGG CCAGCATCCT CATCGAGCCG GCCGGCATGT ATGACTATCT GGTCTACCAG
GCCGACAAGC GACTGACCGT CAGTGTCAAG GCGAAGCCCC AGGACAGCGG AGCCGGGCGT
GATGCCGGTC GCTTCGCGTA TACCGGCGAG AGGCTGTCGC TGAATTTCCA GGATATCGAT
GTCCGTTCGG TCCTGCAGTT GATCGCCGAT TTCACCGATC TCAACCTGGT GGCCAGCGAC
ACGGTACAGG GCAATATCAC CCTGCGCCTG CAGAATGTGC CCTGGGATCA GGCGCTCGAC
CTGGTGCTCA GGACCAAGGG ATTGGACAAG CGCAAGATCG GCAACGTGCT GTTGGTGGCG
CCGGCCGACG AAATCGCGGC ACGCGAGCGC CAAGAGCTGG AGGCACAGCA GCAGATCGCC
GAACTGGCCC CCCTGCGTCG CGAATTGCTC CAGGTGAACT ACGCCAAGGC GACGGACATC
GCCAAACTGT TCCAGTCGGT CACCAGCAGC GATGAGGTGG AAGAGCAGCG CGGCTCCATC
ACCGTCGACG AGCGGACCAA CAATATCATC GCCTACCAGA CCCAGGACCG TCTGGACGAG
CTGCGGCGGA TCGTCGCCCA ACTGGACGTC CCGGTGCGTC AGGTGATGAT CGAGGCGCGC
ATCGTCGAGG CCAACGTCGA TTACGACAAG AGCCTGGGGG TGCGCTGGGG CGGAAGCTTC
GTCAACGACC AGTGGAGCCT GTACGGCAAG GATGGCGCGC AATCCGTCGA TGACGGACAG
GTATTCCTGC CGGGAACCGG CCAGGTCGGC AACTTCACCC TGGAAGATGG CATGGCTCCC
GTTCCCTTCG TCGACATGGG GGTTGCGAAC AGTACTTCGG GTCTCGGCAT CGGCTTCATT
TCCGATCACC TGATCCTCGA CCTCCAACTG TCGGCCATGG AAAAGACCGG CAATGGAGAA
GTCATTTCCC AGCCCAAGGT TCTCACCTCG GACAAGGAGA CGGCGAAGAT CCTGACCGGC
GAGGAGATTC CCTACCAGGA GGCCAGCTCC AGCGGCGCGA CCAGCACTTC CTTCAAGGAG
GCGGCTCTGT CGCTGGAGGT GACGCCGCAA ATCACTCCCG ACAACCGCAT CATCATGGAG
GTGAAGGTGA CCAAGGATCA GGCGGACTTC GCCAAGGCCC TGAACGGTGT GCCGCCGATC
AACAAGAACG AGGTCAACGC CAAGGTGCTG ATCGGCGACG GCGAAACCAT CGTGATCGGC
GGAGTCTTCT CCAATATCCA GGCCAAGTCC GTGGACAAGG TGCCGTTCCT CGGCGACCTG
CCGTTCATCG GGCGCCTGTT CCGCCGCGAC GTGGTCGCCG ACAGCAAATC CGAGCTGCTT
GTTTTCCTGA CTCCGCGTAT TCTTAACAGC CAGGCTATCG CTGTGAGTCG TTGA
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| Protein sequence | MGGSGMKKSS RSALRHPSMD STLSRLGILV LTALLSPELM AADLESLDVA ALPGDRVELK
LSFDEAVPAP RGYTIDQPAR IALDLPGVTN KLRTKYRELG VGNARSVTLV EASGRTRMIV
NLAAMSPYST RSEGHDLYVL IGESATVTRQ SRSASLAVAQ AKPYVTPGKA VRGIDFQRGE
QGEGNVIIDL SSPGMNPDLQ EQGGKIRLDF PGTQLPESLR ARLDVKDFAT PVHFVSASSQ
AGKASILIEP AGMYDYLVYQ ADKRLTVSVK AKPQDSGAGR DAGRFAYTGE RLSLNFQDID
VRSVLQLIAD FTDLNLVASD TVQGNITLRL QNVPWDQALD LVLRTKGLDK RKIGNVLLVA
PADEIAARER QELEAQQQIA ELAPLRRELL QVNYAKATDI AKLFQSVTSS DEVEEQRGSI
TVDERTNNII AYQTQDRLDE LRRIVAQLDV PVRQVMIEAR IVEANVDYDK SLGVRWGGSF
VNDQWSLYGK DGAQSVDDGQ VFLPGTGQVG NFTLEDGMAP VPFVDMGVAN STSGLGIGFI
SDHLILDLQL SAMEKTGNGE VISQPKVLTS DKETAKILTG EEIPYQEASS SGATSTSFKE
AALSLEVTPQ ITPDNRIIME VKVTKDQADF AKALNGVPPI NKNEVNAKVL IGDGETIVIG
GVFSNIQAKS VDKVPFLGDL PFIGRLFRRD VVADSKSELL VFLTPRILNS QAIAVSR
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