Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_45180 |
Symbol | |
ID | 7763387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4579286 |
End bp | 4580659 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643807367 |
Product | Major facilitator family transporter |
Protein accession | YP_002801608 |
Protein GI | 226946535 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCCC CATTGATTCG TAGAACATAT CAAATCAGTC GAACAATATA TTGGAACCGG GAATATCGCC TCCCCTATGC TGGTCGGCAT CCCATCGGCT ACCAGCCGAC GATCGCCCGT ACCGAGGTCG AGATGAATAG CCTTGCCGCC CAACCCGCGC CCGCCAGCGC CGCAGCCGCT CCCCGGATCG AAAAGGGCAC GACGCAATTC CGCCGTGCCT GCTGGGCGCT GTTCGCCGCC GGCTTCGCCA GCTTCGCCCT GCTCTACTGC GTGCAGCCGA TGATGCCGGC ATTCTCCGCG GCCTTCGCCC TGAACGCGGC GCAGAGCAGC CTGGCGTTGT CGATCTCGAC CATCGCCCTG GCCATGGGCC TGCTGCTCAC CGGTCCGCTG TCGGACGCCA TCGGCCGCAA GCCGGTGATG GTCACTGCGC TGTGTGCGGC GGCGCTGCTC ACCCTGCTCA GCCCGCTGGT GCCCGGCTGG CATGCCTTTC TGCTGCTTCG TGCGCTGCTC GGCCTGGTCC TGAGCGGCCA GGTGGCGGTG GCGATGTCCT ATCTCAGCGA AGAGATAGAT CCGCGCCATC TGGGCCTGGC CATGGGCCTG TACATCTCCG GCAACTCCCT GGGCGGCATG GGCGGCCGGC TGATCGGCGG CGTGCTGCTG GACTTCTTCT CCTGGCAGGC GGCGCTGGCC GCCCTCGGCC TTCTGGCGCT GCTCGCGGCA CTGACGTTCT GGCGCCTGCT GCCGGATTCG CGGCACTTCC AGGCGACCCC ACTGAGCTTC GCCAACCTGG CCCACGGCCT GCGCCTGCAC TTTTCCGACC AGGGCCTGCC CTGGCTGTTC CTCGAAGCCT TCCTGCTGGT CGGCAGCTTC GTCGCCCTGT TCAACTACAT GAGCTTCCGT CTGCTCGAGC CGCCCTACGG ACTGAGCATG AGCCTGGTCG GCCTGCTTTC GGTGGTCTAC CTGTCGGGCA CCTACAGTTC GACCCAGGCC GGCGCGCTGG CCGACCGCCT GGGCCGGCAC TGGGTGTTCT GGCCGTCGAT CCTGCTGATG CTCGGCGGCG TCCTGCTGAC CCTGTGCGCC CCGCTGGGGC TGGTGCTCGC CGGCATGCTG CTGTTCGCCT TCGGTTTCTT CGCCGCCCAC TCGCTGGCCA GCAGTTGGGT CGGCCGCCGC GCCCTGCAGG CCCGCGGCCA GGCTTCGTCG CTGTACCTGT TCAGCTTCTA CGCCGGCTCC AGCGTGGCCG GCACGGCGGG CGGCTTCTTC TGGCAGCACG GCGGCTGGAC CGGCGTCGGC CTGTTCATCG CCGCCCTGCT CGGCCTCGCC CTGATCGTGG CCCTGCGCCT GTCGCGCCTG CCGCCGAAGC AGGCACTGGC CTGA
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Protein sequence | MTAPLIRRTY QISRTIYWNR EYRLPYAGRH PIGYQPTIAR TEVEMNSLAA QPAPASAAAA PRIEKGTTQF RRACWALFAA GFASFALLYC VQPMMPAFSA AFALNAAQSS LALSISTIAL AMGLLLTGPL SDAIGRKPVM VTALCAAALL TLLSPLVPGW HAFLLLRALL GLVLSGQVAV AMSYLSEEID PRHLGLAMGL YISGNSLGGM GGRLIGGVLL DFFSWQAALA ALGLLALLAA LTFWRLLPDS RHFQATPLSF ANLAHGLRLH FSDQGLPWLF LEAFLLVGSF VALFNYMSFR LLEPPYGLSM SLVGLLSVVY LSGTYSSTQA GALADRLGRH WVFWPSILLM LGGVLLTLCA PLGLVLAGML LFAFGFFAAH SLASSWVGRR ALQARGQASS LYLFSFYAGS SVAGTAGGFF WQHGGWTGVG LFIAALLGLA LIVALRLSRL PPKQALA
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