Gene Avin_45180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45180 
Symbol 
ID7763387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4579286 
End bp4580659 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content68% 
IMG OID643807367 
ProductMajor facilitator family transporter 
Protein accessionYP_002801608 
Protein GI226946535 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCC CATTGATTCG TAGAACATAT CAAATCAGTC GAACAATATA TTGGAACCGG 
GAATATCGCC TCCCCTATGC TGGTCGGCAT CCCATCGGCT ACCAGCCGAC GATCGCCCGT
ACCGAGGTCG AGATGAATAG CCTTGCCGCC CAACCCGCGC CCGCCAGCGC CGCAGCCGCT
CCCCGGATCG AAAAGGGCAC GACGCAATTC CGCCGTGCCT GCTGGGCGCT GTTCGCCGCC
GGCTTCGCCA GCTTCGCCCT GCTCTACTGC GTGCAGCCGA TGATGCCGGC ATTCTCCGCG
GCCTTCGCCC TGAACGCGGC GCAGAGCAGC CTGGCGTTGT CGATCTCGAC CATCGCCCTG
GCCATGGGCC TGCTGCTCAC CGGTCCGCTG TCGGACGCCA TCGGCCGCAA GCCGGTGATG
GTCACTGCGC TGTGTGCGGC GGCGCTGCTC ACCCTGCTCA GCCCGCTGGT GCCCGGCTGG
CATGCCTTTC TGCTGCTTCG TGCGCTGCTC GGCCTGGTCC TGAGCGGCCA GGTGGCGGTG
GCGATGTCCT ATCTCAGCGA AGAGATAGAT CCGCGCCATC TGGGCCTGGC CATGGGCCTG
TACATCTCCG GCAACTCCCT GGGCGGCATG GGCGGCCGGC TGATCGGCGG CGTGCTGCTG
GACTTCTTCT CCTGGCAGGC GGCGCTGGCC GCCCTCGGCC TTCTGGCGCT GCTCGCGGCA
CTGACGTTCT GGCGCCTGCT GCCGGATTCG CGGCACTTCC AGGCGACCCC ACTGAGCTTC
GCCAACCTGG CCCACGGCCT GCGCCTGCAC TTTTCCGACC AGGGCCTGCC CTGGCTGTTC
CTCGAAGCCT TCCTGCTGGT CGGCAGCTTC GTCGCCCTGT TCAACTACAT GAGCTTCCGT
CTGCTCGAGC CGCCCTACGG ACTGAGCATG AGCCTGGTCG GCCTGCTTTC GGTGGTCTAC
CTGTCGGGCA CCTACAGTTC GACCCAGGCC GGCGCGCTGG CCGACCGCCT GGGCCGGCAC
TGGGTGTTCT GGCCGTCGAT CCTGCTGATG CTCGGCGGCG TCCTGCTGAC CCTGTGCGCC
CCGCTGGGGC TGGTGCTCGC CGGCATGCTG CTGTTCGCCT TCGGTTTCTT CGCCGCCCAC
TCGCTGGCCA GCAGTTGGGT CGGCCGCCGC GCCCTGCAGG CCCGCGGCCA GGCTTCGTCG
CTGTACCTGT TCAGCTTCTA CGCCGGCTCC AGCGTGGCCG GCACGGCGGG CGGCTTCTTC
TGGCAGCACG GCGGCTGGAC CGGCGTCGGC CTGTTCATCG CCGCCCTGCT CGGCCTCGCC
CTGATCGTGG CCCTGCGCCT GTCGCGCCTG CCGCCGAAGC AGGCACTGGC CTGA
 
Protein sequence
MTAPLIRRTY QISRTIYWNR EYRLPYAGRH PIGYQPTIAR TEVEMNSLAA QPAPASAAAA 
PRIEKGTTQF RRACWALFAA GFASFALLYC VQPMMPAFSA AFALNAAQSS LALSISTIAL
AMGLLLTGPL SDAIGRKPVM VTALCAAALL TLLSPLVPGW HAFLLLRALL GLVLSGQVAV
AMSYLSEEID PRHLGLAMGL YISGNSLGGM GGRLIGGVLL DFFSWQAALA ALGLLALLAA
LTFWRLLPDS RHFQATPLSF ANLAHGLRLH FSDQGLPWLF LEAFLLVGSF VALFNYMSFR
LLEPPYGLSM SLVGLLSVVY LSGTYSSTQA GALADRLGRH WVFWPSILLM LGGVLLTLCA
PLGLVLAGML LFAFGFFAAH SLASSWVGRR ALQARGQASS LYLFSFYAGS SVAGTAGGFF
WQHGGWTGVG LFIAALLGLA LIVALRLSRL PPKQALA