| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_45090 |
|---|
| Symbol | |
|---|
| ID | 7763378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4567622 |
|---|
| End bp | 4569370 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807358 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_002801599 |
|---|
| Protein GI | 226946526 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00181989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATGCAG CCACCATCAA CACCCTGTTC CTGATCGGCG CGCTGCTGGT GGGCTCCAGT
ATCCTGCTCA GCTCCCTGTC CACCAGGCTC GGCATCCCGA TCCTGGTGAT CTTCCTCGGC
GTGGGCATGC TCGCCGGAGT CGACGGCATC GGCGGCATCG TCTTCAACGA CTACTCCCTG
GCCTTCCTGG TCAGCAACCT GGCCCTGGCG ATCATCCTGC TCGACGGCGG CATGCGCACC
CGCGTGGCCA CCTTCCGCGT GGCGCTCTGG CCGGCGATGT CGCTGGCCAC CCTAGGCGTG
GCGGTCACCT CCGGTCTGAC CGGGCTGGCC GCAGCCTGGC TGTTCGATCT CAGCCTGATG
CAGGGCCTGC TGATCGGCTC CATCGTCGGC TCCACCGACG CCGCGGTGGT GTTCAACCTG
CTCAACGGCA AGGGGCTCAA CGAACGGGTC GGCGCCACCC TGGAAATCGA ATCGGGCAGC
AACGACCCGA TGGCGGTGTT CCTCACCGTG ACCCTGATCG ACATGCTCGC CTCCGGCCGG
GGCGATTTCG GCTGGGGCGT GCTGGTCAGC CTGCTGCAGC AGTTCGGCAT CGGCATCGCT
CTCGGCCTCG CCGGCGGCTG GCTGCTGCTG AAACTGATCA ATAACCTCGA CGTGGCCGAC
GGCCTCTATC CACTGCTGGC GGTCAGCGGC GGCATCATGA TCTACGCCAT CGCCGGCGCG
ATCGGCGGCA GCGGCATCCT CGCCGTCTAC GTCTGCGGCC TGCTGATGGG CAACCGGCCG
ATTCGCAATC GCCACGGCAT CCTGCACATG TTCGACGGCC TGGCCTGGCT CAGCCAGATC
GGCATGTTCC TGGCCCTCGG TCTGTTGCTC ACGCCCAGCC AGTTGCTGCC CATCGCCGCG
CCGGCACTGG CCCTGTCGTT GTGGATGATC CTCGTCGCCC GCCCGCTGTC GGTGTTCCTC
GGCCTCCTGC CGTTTCGCAA CTTCCACCTG CGCGAGCGGC TGTTCATCTC CTGGGTCGGC
CTGCGCGGCG CGGTACCGGT GATCCTCGCG GTCTTTCCGC TGATGGCCGG GCTGCCGCAG
GCGAACCTCT ACTTCAACGT GGCCTTCTTC ATCGTGCTGG TGTCGCTGCT GCTGCAGGGC
ACCACCCTCG GCTGGGCGGC GCGCAAGGCC AGGGTCGAGG TGCCGCCTTC GCCCACGCCG
ATCTCGCGGA CCGGCCTGCA GATCCACCCC ACCAGCCGCT GGGAACTGTT CATCTACCGC
CTGAGCGCCA ACAAGTGGTG CATCGGCGCC GCCCTGCGCG ACCTGAAGAT GCCCGACGGC
ACGCGCATCG CCGCCCTGTT CCGCGGCCGG CAACTGCTCC ATCCGTCCGG CAGTACCCGC
CTGGAGATTG GCGACCTGCT CTGTGTGATC GGCCACGAGG AGGATCTGCC GAGTCTCGGC
AAGCTGTTCA GCCAGCCGCC CAAGACCGGC CAGGATCTGC GCTTCTTCGG CGACTTCGTG
CTCGAAGGCG ATGCCGAGCT GGCCGCCCTG GCGGCGCTCT ACGGCCTGAA GCTCGACGGC
ATCGACGGCA ACCAGTCGCT CGGCCGTTTC ATCGCCGGGC TGATCGGCGG CCATCCGGTG
GTCGGTGATC AGGTGGAATG GAACGGCATG ACCTGGACCG TGGCGGCCAC CGAAGGCGAC
CGGGTGCGCA AGGTCGGCCT GAAGTTTCCA GAGGATGGCA GCCGTTCGGC ACCTATTTTG
CTCATCTGA
|
|---|
| Protein sequence | MDAATINTLF LIGALLVGSS ILLSSLSTRL GIPILVIFLG VGMLAGVDGI GGIVFNDYSL
AFLVSNLALA IILLDGGMRT RVATFRVALW PAMSLATLGV AVTSGLTGLA AAWLFDLSLM
QGLLIGSIVG STDAAVVFNL LNGKGLNERV GATLEIESGS NDPMAVFLTV TLIDMLASGR
GDFGWGVLVS LLQQFGIGIA LGLAGGWLLL KLINNLDVAD GLYPLLAVSG GIMIYAIAGA
IGGSGILAVY VCGLLMGNRP IRNRHGILHM FDGLAWLSQI GMFLALGLLL TPSQLLPIAA
PALALSLWMI LVARPLSVFL GLLPFRNFHL RERLFISWVG LRGAVPVILA VFPLMAGLPQ
ANLYFNVAFF IVLVSLLLQG TTLGWAARKA RVEVPPSPTP ISRTGLQIHP TSRWELFIYR
LSANKWCIGA ALRDLKMPDG TRIAALFRGR QLLHPSGSTR LEIGDLLCVI GHEEDLPSLG
KLFSQPPKTG QDLRFFGDFV LEGDAELAAL AALYGLKLDG IDGNQSLGRF IAGLIGGHPV
VGDQVEWNGM TWTVAATEGD RVRKVGLKFP EDGSRSAPIL LI
|
|---|
| |