Gene Avin_44550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_44550 
Symbol 
ID7763326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4506813 
End bp4507928 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content66% 
IMG OID643807307 
ProductABC transporter periplasmic component 
Protein accessionYP_002801548 
Protein GI226946475 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTCA GCACTTGGGG ACGGATCGCC TTCGCGCTCC GCCCGTTGCA AGGGGAAATC 
GTCATGCCTG TGAATGCCAG CCGTCGATCG GCGCTCAAGA CTCTCGCCCT GCTCGGATCG
GCGGGCGCTG CCAGCCTCCT GCTGCCCGGC TGCTGGAAGA AGGAAGAACA GGGAGCCGCC
GGGTCGGCGG GCGCGCCGGC CGTGGTGAAG GGCGTCGGCG ATCCGGTGGT GGAGTTCAAG
TATCCGGACA ACCCCACCTT CGACCTGATT TACCTGGCCG AGGCGCTGGG TTATTTCGAG
GGCAGCCGGA CGCGTCCGAA GTACGTCGGC AAGATCGCTG CGCCGCAGAT CATTCCGTTG
GTCGGCACCG GCGAGATCGA TTTCGGTACG CGCATGGTGC CGCTGGTCAT CTCGGCGATC
GCCAGCGGCC TGGACATCAA GGTGGTGTCC GCCGGCGGCA AGACCCTGCA GGAAGCCCCG
CACATGAAGT ACTTCGCGCA CCGGGAGTCG GGCATCCGCA CGCCGAAGGA CCTCGAGGGC
AAGACGGTGG GCTTCAACAG CTTCGGTGCC TGCGCCGAGT TCGTCACCAA GAAGTACCTG
CGCGCCCAGG GCGTCGACGT GAACCGTATC AACTGGCTGG TGGTGCCGGA CAACCAGGCC
GAGCAGACCC TGGCGACGCG CAACATCGAC GTGGCGATCA TCCACCCGCC ACATTCCGGC
GGCGCCGAAC AGAACCCCGC GCTGGTCAAG CTGTGGAGCG ACTACGACCT CGACGGCGGA
CTGGGCGGCA TGGCCCCCTA CAGCGTGTAC GGCCGCTTCG CCCGCGAGCA TCCCGAGGCC
ACCCGCGACC TGGTGAGCGC CATCGCCCGG GCGGCCAACT GGGTCAACGC CAACCCCGAC
GAGGCGCGCA GGATCACTTC CGAGCGCATC GGCATGGAGC TGCGCCTGGT CGAGCGTTTC
GCCTATGTCG AGAACCTGGT GGTCAGCGAG CCGCCGATCC AGTACTACAT CGACATCCTC
GAGGCCGAGG GCAAGATTCC GTCCGGCAAG GTGCGGGTGA AGGACGTCTA CACCAACGAG
TTCAATCCCT TCGCCAGCCC GGAGGCTCTG GCGTGA
 
Protein sequence
MGFSTWGRIA FALRPLQGEI VMPVNASRRS ALKTLALLGS AGAASLLLPG CWKKEEQGAA 
GSAGAPAVVK GVGDPVVEFK YPDNPTFDLI YLAEALGYFE GSRTRPKYVG KIAAPQIIPL
VGTGEIDFGT RMVPLVISAI ASGLDIKVVS AGGKTLQEAP HMKYFAHRES GIRTPKDLEG
KTVGFNSFGA CAEFVTKKYL RAQGVDVNRI NWLVVPDNQA EQTLATRNID VAIIHPPHSG
GAEQNPALVK LWSDYDLDGG LGGMAPYSVY GRFAREHPEA TRDLVSAIAR AANWVNANPD
EARRITSERI GMELRLVERF AYVENLVVSE PPIQYYIDIL EAEGKIPSGK VRVKDVYTNE
FNPFASPEAL A