Gene Avin_44540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_44540 
Symbol 
ID7763325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4505950 
End bp4506816 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID643807306 
ProductABC transporter 
Protein accessionYP_002801547 
Protein GI226946474 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGCA TAGTCGCGCG CGACCTGCGC ATGGAGTTCA CCTCCCGGGA CGAGAGCGGC 
CGCGCCGAGC GGGTCGTGGC CCTGGAGCAC TTCGACCTGG AGGTACGCGC CGGCGAGTTC
CTCTCGGTGC TCGGCCCGTC CGGCTGCGGC AAGTCGACCT TCCTGAGCAT CCTCGCCGGG
CTGGCGCAGA AAAGCGGTGG CAGCCTGCTG GTCGACGGCC AACCGCTGGA GGGTATCAAC
GCCCGGCAGG GTGTGGTGTT CCAGGGCTAC GCCCTGTTTC CCTGGCGCAC CGTGCTGGAG
AACATCGAGG TGGGCCTGGA GATCCGTGGC GTCGGCAAGG CCGAGCGCCG CGAGCGGGCC
CGCGAGTACC TGGAGCTGGT GGGCCTGGGC GGTTTCGGCG CGCGCTATCC CCACGAAATT
TCCGGCGGCA TGCGCCAGCG CGTGGCCATC GCCCGTTCGC TGGTCTACGA GCCCGAGGTG
CTGCTCATGG ACGAGCCGTT CGCCGCGCTG GACGCGCAGA CCCGGGAGAT CCTCCAGGGC
GAGCTGCTGC GCATCTGGGA CCGGCACAAG AAGACCATCG TGTTCATCAC CCACAGCCTC
GACGAGGCGA TCTTCCTCTC CGACCGCATT GCGGTGATGA CCCACCGGCC GGGAAGGATC
AAGGAGATCA TCGAGGTGCC GCTGCCGCGT CCGCGGCTCG CCGAGCTGCG CAACTCCGAG
GATTTCGTGC ATCTGCGCCA GCGCGCTTGG GAAGTGCTCA AGGACGAGGT GCGCTTCGCC
ACGGCTCCGG TGCCGGCCGC GACCTCCACG CGCGCGGCCG ATTGGCCGGC GAGCGCGCAG
GCCGGCCGGC GGCTGGCCAA GGGATAG
 
Protein sequence
MSSIVARDLR MEFTSRDESG RAERVVALEH FDLEVRAGEF LSVLGPSGCG KSTFLSILAG 
LAQKSGGSLL VDGQPLEGIN ARQGVVFQGY ALFPWRTVLE NIEVGLEIRG VGKAERRERA
REYLELVGLG GFGARYPHEI SGGMRQRVAI ARSLVYEPEV LLMDEPFAAL DAQTREILQG
ELLRIWDRHK KTIVFITHSL DEAIFLSDRI AVMTHRPGRI KEIIEVPLPR PRLAELRNSE
DFVHLRQRAW EVLKDEVRFA TAPVPAATST RAADWPASAQ AGRRLAKG