| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_44510 |
|---|
| Symbol | |
|---|
| ID | 7763322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4503064 |
|---|
| End bp | 4504215 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643807303 |
|---|
| Product | Acyl-CoA dehydrogenase/oxydase |
|---|
| Protein accession | YP_002801544 |
|---|
| Protein GI | 226946471 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACG ATCTGCACAC CCTGCTCGAA CGTATCAAGG CCAGCGCCGT CGAGCGCGAC
GCCCGCGGCG GCCATGCCGC CGAGGAAAAG GCGCTGCTGC GCGACGCCGG CCTGCTGCTG
CTGGCCATTC CCCGCGATCT GGGCGGCCAA GAGCGCAACT GGCAGGAAAT CTTCGCCCTG
GTGCGCCAAC TGGCCGCCGT CGACAGTTCC CTGGCGCACA TCCTGGCCTT CCACCAGTTG
CAGGTCGCCA CGCTGCTGAT CTACGGCAAC GAAGAACAGC AGCAGCGCCT GCTCCGCCAC
ACCGCCGAGC ACCAGTGCTG GTGGGGCAAC GGCATGAACC CGCTGGACCG CCGCCTGGTC
GCCACGCCGG CGGCCGAAGG CTTCCTGCTC GACGGCAGCA AATCCTTCTG CTCGGGCACC
GTCGGCTCGC ACTTCATGAC CCTCTCGGCG GTGCTCGGCG AACAGGCCCA GCCGCTGCTC
GGCGTGGTTT CCACCGAGCA TCCCGGCGTG CAGGTCGTCG ACGACTGGGA CCCGATCGGC
CAGCGCCAGA CCGACAGCAA CACCATCGCC TTCGCCCGGG TGCCGCTGGA GGCGCGCAAC
GTGCTGCGCG CGGCGGACGC CACGCCGAGC GCCTTCCATA CCCTGCGCAA CTGCTTCGGC
CAACTGGTGC TGACCAACCT TTACCTCGGC ATCGCCGAAG GCGCCTTCGC CGAGGCCCGC
GACTACGCCC ACGGCCAGGC GCGGCCCTGG CTGACCTCGC CGGCCGCGCA AGCGGTGGAC
GATCCCTTCA CCCAGAACCG CTTCGGCGAA ATGCATGTGC AGATCGCCGC CGGCCGCGCC
CTGGCCGAGC GCGCCGCCGA ACTGATCGAC CGGGCGTTTT CCCGCGGGCC CGCGCTGACC
GCCGCGGAGC GCGCCCGGGT GGCGGTCGCG GTGGCCGAGG CCAAGGTACT GGCCCATCGC
GCCGGACTGT TCGCCAGTCA GGAACTGTTC GAGGTGGTCG GCGCCCGCGG CACCCGCGCC
TCGCTCGGTT TCGACCGTTT CTGGCGCAAC GTGCGCACCC ACACCCTGCA CGACCCCATC
GACTACAAGC TGAACATGCT CGGCCGCTGG GCGCTCAAGG ACGAGGCGCC CGACCCGGCG
AACTACACCT GA
|
|---|
| Protein sequence | MSHDLHTLLE RIKASAVERD ARGGHAAEEK ALLRDAGLLL LAIPRDLGGQ ERNWQEIFAL
VRQLAAVDSS LAHILAFHQL QVATLLIYGN EEQQQRLLRH TAEHQCWWGN GMNPLDRRLV
ATPAAEGFLL DGSKSFCSGT VGSHFMTLSA VLGEQAQPLL GVVSTEHPGV QVVDDWDPIG
QRQTDSNTIA FARVPLEARN VLRAADATPS AFHTLRNCFG QLVLTNLYLG IAEGAFAEAR
DYAHGQARPW LTSPAAQAVD DPFTQNRFGE MHVQIAAGRA LAERAAELID RAFSRGPALT
AAERARVAVA VAEAKVLAHR AGLFASQELF EVVGARGTRA SLGFDRFWRN VRTHTLHDPI
DYKLNMLGRW ALKDEAPDPA NYT
|
|---|
| |