| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_44500 |
|---|
| Symbol | |
|---|
| ID | 7763321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4502168 |
|---|
| End bp | 4503073 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807302 |
|---|
| Product | Transcriptinal regulator, LysR family |
|---|
| Protein accession | YP_002801543 |
|---|
| Protein GI | 226946470 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.581761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGC TTCGCCAACT GCGCTACTTC ATGGCACTGG CCGAACATCT GCACTTCGGC
AAGGCCGCCG AGTCCCTGCA CATCACCCAG CCGCCCCTGA GCCGGCAGAT TTCGGCCCTG
GAGGCCGATC TCGGCGTCGT GCTGTTTTCC AGGCACTCGC GGTCGGTCGA ATTGACCGCG
GCGGGCCGCG ACTTCCAGCA GCATGCGAAG ACCGCCCTGG CGGAACTGGA TCTCGCGATC
CGTTCGACCC GCGCCAGCGC CCGCGGGGAA CGCGGCGAGC TGCGCGTGAG CTTCACCATG
GTCGCCGCGT GGATTCTGCT GCCCGAACTG CTCAAGGCGT ACAGCGATGC CTATCCGGAC
GTGAGCCTGG CGCTCAACGA GGTACTGCCC AGGGACCTCG GCCCGGCCCT GGAACGCGGC
GAGGCGGATA TCGCCTTGAC CTTTCCCTCT TCGGGATCGA AATCCCTGTG TTACCGGGCA
CTGCGCCGCG AACCGCTCTG CGCCGTCCTG CCGGCCAGCC ATCCGCTCGC CGCCGCGACG
GAATTCAGCA TCGCGGCACT GGCGGACGAA CCCTTCATCA CCTTCCCCCG GCAAACCGCC
CCGGCCCTGC ATGAGGCGGT GATGAGCTGC TGCCGCCGCG CCGGGTTCGA GCCGAAGATA
CGCTTGGAAA CGCATCTCCA GCAGACCATC GTCAACCTCG TCGCCGAGGG CCTGGGCGTC
TCCGTGGTAC CCGGATCGAT GCGCAAGATG CGGATGCCCG GCGTGGCGTT CAAGGCGATC
GACCGCTCCC CGCCGGTCGA ATACGGGGTG ATCTGGAATC CCCGCAACGA AAATCCCTGC
CTGAACACTT TTCTCCGCTG CGTCGGCGTG GAGGAAACGG GAGATCGCGG CCCCGCTCAG
GTGTAG
|
|---|
| Protein sequence | MIELRQLRYF MALAEHLHFG KAAESLHITQ PPLSRQISAL EADLGVVLFS RHSRSVELTA
AGRDFQQHAK TALAELDLAI RSTRASARGE RGELRVSFTM VAAWILLPEL LKAYSDAYPD
VSLALNEVLP RDLGPALERG EADIALTFPS SGSKSLCYRA LRREPLCAVL PASHPLAAAT
EFSIAALADE PFITFPRQTA PALHEAVMSC CRRAGFEPKI RLETHLQQTI VNLVAEGLGV
SVVPGSMRKM RMPGVAFKAI DRSPPVEYGV IWNPRNENPC LNTFLRCVGV EETGDRGPAQ
V
|
|---|
| |