Gene Avin_44080 details

Gene Information

• Locus tag: Avin_44080
• ID: 7763281
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4461406
• End bp: 4462032
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643807263
• Product: PqiA family protein
• Protein accession: YP_002801504
• Protein GI: 226946431
• COG category: [S] Function unknown
• COG ID: [COG2995] Uncharacterized paraquat-inducible protein A

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.179105
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGGCC CGGCGAGCGC CGCCCGCTGG CATCTGGCGA CCTGTCACGG CTGCGGCCTG 
CTGAGCCGCA CGGGCGCGGG CCAGGCCGCC CGCTGCCCGC GCTGCGGCAC GCCCCTGCAC 
GCACGCAAGC CGGACAGCAT CGCCCGTACC TGGGCCTTCA TCGTCGCCGC GGCGATCCTC 
TACGTCCCGG CCAACCTGCT GCCGATCATG GAGACCAGCT CCCTGTTCGG CGCCCAGCAG 
GACACCATCA TGAGCGGCGT GGTGTACCTG TGGGTGTCCG GCTCCTGGCA CCTGGCCCTG 
GTGGTGTTCG TCGCCAGCAT CCTGGTGCCG ATGGCCAAGC TCATCGCTCT GGTCATCCTG 
GCCCTGTCGG TGCAGTCGCG CGCCCGCTGG CAGCCGCTGC AGCGCACCCG CCTGTATCGC 
CTGGTGGAAC TGGTCGGGCG CTGGTCGATG CTCGATATCT ACGTGGTGAC CCTGCTGGTC 
GCCCTGGTGC AGCTCGAAGC CCTGGCGACC ATCCGCCCCG GCAGCGGCGC CCTGGCCTTC 
GGCGCCGTGG TGGTGCTGAC CATGTTCGCG GCGATGAGCT TCGATCCGCG CCTGATCTGG 
GACGTCCTGG AGCGGGACGA TGGCTGA 

 

Protein sequence

MKGPASAARW HLATCHGCGL LSRTGAGQAA RCPRCGTPLH ARKPDSIART WAFIVAAAIL 
YVPANLLPIM ETSSLFGAQQ DTIMSGVVYL WVSGSWHLAL VVFVASILVP MAKLIALVIL 
ALSVQSRARW QPLQRTRLYR LVELVGRWSM LDIYVVTLLV ALVQLEALAT IRPGSGALAF 
GAVVVLTMFA AMSFDPRLIW DVLERDDG