| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_43900 |
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| Symbol | sfnR |
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| ID | 7763263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 4437230 |
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| End bp | 4438333 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643807245 |
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| Product | Sigma54-dependent transcriptional activator protein |
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| Protein accession | YP_002801486 |
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| Protein GI | 226946413 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGC TCACCCTTCC CCCGTCCCCC GCGCTGGCCA CCTCGGTCCG GGCGACCGCG
CAGGTCTTCG CCGACCCCAA GTCGCAGGCC CTGCTCGCCC ACCTGCAACA GATCGCGCCG
AGCGACGCCA GCGTGTTGAT CATCGGCGAG ACCGGCACCG GCAAGGAGCT GGTGGCCCGC
CACGTGCACA ACCTCAGCAA GCGCCGCGGC GGCCCCTTCG TCGCGGTGAA CTGCGGCGCT
TTCTCGGAAA ATCTGGTGGA AGCCGAACTG TTCGGCCACG AGAAGGGCGC CTTCACCGGC
GCCCTCAGCG CCAAGGCCGG CTGGTTCGAG GCGGCCAACG GCGGCACCCT GTTCCTCGAC
GAGATCGGCG ACCTGCCGCT GGCGATCCAG GTCAAGCTGC TGCGCGTGCT GCAGGAGCGG
GAGGTGGTGC GCCTCGGCTC GCGCAAGAGC ATCCCCATCG ACGTGCGGGT GCTCGCCGCG
ACCAACGTGC AACTGGAGAA GGCCATCAAC GCCGGCAACT TCCGCGAGGA CCTCTACTAC
CGCCTCAACG TGGTCAGCCT CGAACTCGCC CCGCTGCGCG AGCGCCCCGG CGACGTGCTG
CCGCTGGTCC GCCACTTCAT CGGCGAATAC AGCCGGCGCC TGGGCTACAG CGAAATCGCC
CTGGACCGGG ACGCCGAGGA GAAGCTGCTC GCCTATTCCT GGCCGGGCAA CATCCGCGAG
CTGGAAAACG TCATCCACCA CACCCTGCTG ATCTGCCGCA ACGACCTGAT CCGCGCCGCC
GACCTGCACC TGTCCAACCT GCGCATCGAA CGCCAGGAGG AAACCGCCCC GAGCGCCGAC
GAGTCGGCCG AGGCGCTGCT GCAGCGCGCC TTCCAGAAGC TCTTCGAGGA GGACTGCGGC
GCCCTGCACG CACGGGTCGA GGCGGCCCTG CTGCGCACCG CCTACCGCTT CTGCCACTGC
AACCAGGTGC ACACCGCCAA CCTGCTCGGC CTCAGCCGCA ACGTCACCCG CGCGCAACTG
ATCCGCATCG GCGAGCTGGT GGTGAACAAG CGCCGCAGCC TGCTGCCGCC GACGAGCCGG
CGACGGGTCG ACCTGTCGAT CTGA
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| Protein sequence | MQLLTLPPSP ALATSVRATA QVFADPKSQA LLAHLQQIAP SDASVLIIGE TGTGKELVAR
HVHNLSKRRG GPFVAVNCGA FSENLVEAEL FGHEKGAFTG ALSAKAGWFE AANGGTLFLD
EIGDLPLAIQ VKLLRVLQER EVVRLGSRKS IPIDVRVLAA TNVQLEKAIN AGNFREDLYY
RLNVVSLELA PLRERPGDVL PLVRHFIGEY SRRLGYSEIA LDRDAEEKLL AYSWPGNIRE
LENVIHHTLL ICRNDLIRAA DLHLSNLRIE RQEETAPSAD ESAEALLQRA FQKLFEEDCG
ALHARVEAAL LRTAYRFCHC NQVHTANLLG LSRNVTRAQL IRIGELVVNK RRSLLPPTSR
RRVDLSI
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