Gene Avin_43800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43800 
Symbol 
ID7763253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4427605 
End bp4428843 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content72% 
IMG OID643807235 
Producthypothetical protein 
Protein accessionYP_002801476 
Protein GI226946403 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.402332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCC AGACGCTTTT GGCGAAGACC GGTGGCGCTG CGGCGGAAGC GGCCTTCGAC 
GGTCCCCTGG GACCCGACGC CCCGGAACTG GAACCCTTGC TGGCGGAAAT CGCCCGGGAT
GCCGAGGAAC GCCGCAAGCC CGGCCAGGAG GGCCATCCCT GGCGCGCCCT GGCGCTGATC
CGCCGGGCGC GGCTGGGCGC GCTGCGCCTG CCGCGCGAGA GCGGCGGCGG TGGCGCCAGC
CTGCGCGAAC TGTTCGGGGT GGTCATTCGC CTGGCCGAGG CCGATCCGGA CGTCGCGCAC
ATCCTGCGCG CGCATTACCT GCTGACCGAC GAGTTCCTGC GCGCGCCGGC CGGCGCCGTG
CGCGACGAAC GCCTGCGCCG GGTGGCGGCC GGGGAAATCT TCGGCAACGC CTACACCGAG
CTGTCGAGCA AACCCGTGGG CAACTACGCG TTCGAGACGC GCCTGTCGCC GGACGGCGAC
GGCTTCCGCC TGAACGGCAC CAAGTACTTC AGCACCGGCA CCCTGTACGC CGACTGGGTG
TACGTGACCG CTTCCCTCGA AGACGGCAGC CCGGCCGGCG CGATCGTCCC GACCGGACGG
GCGGGGCTGC GCATCGTCGA CGACTGGGAC GGCATCGGCC AGAAGTACAC CGGCAGCGGC
ACGACCCACT TCGACGACGT GCGGGTCGAG GCCGACGAGG TGGTCCGGCG CGATACGGCG
AACCAGTTCA ACGCGCTGGC GCAGCTCTAT CTGCACGGCG TCATCGCCGG CATCCTGCGC
AACGTGGTGA GCGATGCCGC GGCGCTGTTG CACGGGCGGG CGCGAACCTT CAGCCACGCC
GCGGCCGCCC GGCCGGCGGA GGACCCGCAA CTGCTGCAGG TGGTCGGCGA ACTGTCGAGC
ACGGCCTTCG CCGCCGAGGC CATAGTGCTG GCGGCGGCGG ACGCGCTGGA CCGCGCCTTC
GCCTCCGGCG TCGGTGGCGA GGTCGATCCG CAACTCGGCC ACGAATCCTC GCTGCGCGCG
GCGCAGGCCA AGGTCAGCGT GGATGCCCTG GCCCTGCGCG CGGCCAGCCT GCTGTTCGAG
GTCGGCGGTT CCTCGGCGGC GCGCCAGTCG GCGCAGCTCG ACCGGCACTG GCGCAACGTC
CGCACCCTGG CCTCGCACAA CCCGACGCTC TACAAGGCGC GGGCCATCGG CGACTACGAG
GTGAACGGCC GGGAGCTGCC GCGCAACGCC TATTTCTGA
 
Protein sequence
MTSQTLLAKT GGAAAEAAFD GPLGPDAPEL EPLLAEIARD AEERRKPGQE GHPWRALALI 
RRARLGALRL PRESGGGGAS LRELFGVVIR LAEADPDVAH ILRAHYLLTD EFLRAPAGAV
RDERLRRVAA GEIFGNAYTE LSSKPVGNYA FETRLSPDGD GFRLNGTKYF STGTLYADWV
YVTASLEDGS PAGAIVPTGR AGLRIVDDWD GIGQKYTGSG TTHFDDVRVE ADEVVRRDTA
NQFNALAQLY LHGVIAGILR NVVSDAAALL HGRARTFSHA AAARPAEDPQ LLQVVGELSS
TAFAAEAIVL AAADALDRAF ASGVGGEVDP QLGHESSLRA AQAKVSVDAL ALRAASLLFE
VGGSSAARQS AQLDRHWRNV RTLASHNPTL YKARAIGDYE VNGRELPRNA YF