Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_43770 |
Symbol | livH |
ID | 7763250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4424216 |
End bp | 4425097 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643807232 |
Product | inner-membrane translocator |
Protein accession | YP_002801473 |
Protein GI | 226946400 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.150883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTCT TTCTGGAAAC CCTGATCGGC GGCCTGCTCG CCGGCACCAT GTATTCGCTG GTAGCGATCG GCTTCGTGCT GATCTACAAG GCCAGCGGCG TGTTCAACTT CGCCCAGGGC GCCATGCTGC TGTTCGCCGC GCTGACCTTC GTCAGCCTGC AGGAGCAGGG GCTGCCCTTC GCCCTGGCGC TGCTGCTCAC CGTGGTGGTG ATGGCCATCG GCGCCATCGT CATCGAGCGC ACGGTGCTGC GCCCGCTGGT CAACCGTTCG CAGATCACCC TGTTCATGGC CACCCTCGGC CTGTCGTTCG TCATCGAGGG GCTGGCGCAG GGGCTGATGG GCGCCCAGGT ACGCGCGCTG GATCTCGGTA TCGAGGACGT GCCGCTGTTT CTCGGCGAGG TGATGGTCAG CCAGTTCGAC CTGGTGGCGG CGGCTACCGC GGCAGTGCTG GTGGCGGTGC TGGCGCTGCT GTTCAACCGC ACGCGGATCG GCGTGTCGCT GCGCGCGGTG GCCGACGACA CCCGCGCCGC GCTGTCCATC GGCATCAACC TCAACCGCAT CTGGCAGATC GTCTGGGCGG TGGCCGGCGT CGTCGGGCTG GTCGCCGGAC TCCTCTGGGG CGCGCGCCAG GGCGTGCAGT TCTCGCTGTC GCTGGTGGTG CTCAAGGCGC TGCCGGTGCT GATCATCGGC GGCTTCACCT CGATCGGCGG GGCCATCGCC GGCGGGCTGA TCGTCGGCGC GGCGGAAAAC CTCGCCGAGG TCTATCTCGG CCCGTACATC GGCGGCGGCA TCACCCCCTG GTTCGCCTAT TTCCTCGCCC TGGTCTTCCT CTACATCCGC CCCGCCGGCC TGTTCGGCGA GCGCGCCATC GAACGAGTGT GA
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Protein sequence | MTFFLETLIG GLLAGTMYSL VAIGFVLIYK ASGVFNFAQG AMLLFAALTF VSLQEQGLPF ALALLLTVVV MAIGAIVIER TVLRPLVNRS QITLFMATLG LSFVIEGLAQ GLMGAQVRAL DLGIEDVPLF LGEVMVSQFD LVAAATAAVL VAVLALLFNR TRIGVSLRAV ADDTRAALSI GINLNRIWQI VWAVAGVVGL VAGLLWGARQ GVQFSLSLVV LKALPVLIIG GFTSIGGAIA GGLIVGAAEN LAEVYLGPYI GGGITPWFAY FLALVFLYIR PAGLFGERAI ERV
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