Gene Avin_43530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43530 
Symbol 
ID7763226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4398660 
End bp4399541 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID643807208 
Productamino acid ABC transporter-like protein 
Protein accessionYP_002801449 
Protein GI226946376 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0533478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT TCTTCGAAGT GCTGATCGGC GGGCTGCTGG CGGGGGTGAT GTATTCCCTG 
GTCGCCATCG GCTTCGTGCT GATCTACAAG GCCTCGGGCG TGTTCAATTT CGCCCAGGGC
GCGATGGTGC TGTTCGCCGC GCTGACCTTC GTCAGCCTGC TCGAACGCGG CGTGCCCTTC
GTCCTGGCCT TTCTGGTCAC CCTGGCGGCC ATGGTGGCGC TGGCGCTGCT GATCGAGCGC
GCGGTGCTGC GCCCGCTGGT CAACCGCTCG CCGATCACCC TGTTCATGGC CACCCTCGGC
CTGTCGTACA TGCTCGAAGG CTTCGCCCAG GCGCTCTGGG GCGCCCAGGT GCACGGCCTG
GACCTGGGCA TCGGCGACGA GCCGCTGGAG ATCGGCGGCC TGCTGCTGTC GCAGTTCGAC
CTGTTCGCCG CCGGCACCGC CGCCGTGCTG GTGGCGGTGC TCTCGCTGCT GTTCAACAAG
ACCCGCATCG GCCTGTCGCT GCGCGCGGTG GCCGACGACC CGCTGGCGGC GCTGGCGCTG
GGCATCCGCC TGCAGCGCAT CTGGGCCGTG GTCTGGGCGG TGGCCGGTTT CGTCGGCCTG
GTCGCCGGTC TCCTGTGGGG GGCGCGCCTG GGTGTGCAGT TCTCCTTGTC GCTGGTGGTG
CTCAAGGCCC TGCCGGTACT GATCATCGGC GGCTTCACCT CGATCGGCGG GGCCATCGCC
GGCGGCCTGA TCGTCGGCGC TTCGGAGAAG CTCGCCGAGG TCTATCTGGG ACCTTTCGTC
GGTGGCGGCA TCGAGAACTG GTTCCCCTAT GTGCTGGCCC TGCTGTTCCT GCTGGTGCGT
CCGGCGGGGT TGTTCGGCGA GCGCGCCATC GAGCGCGTGT AA
 
Protein sequence
MEFFFEVLIG GLLAGVMYSL VAIGFVLIYK ASGVFNFAQG AMVLFAALTF VSLLERGVPF 
VLAFLVTLAA MVALALLIER AVLRPLVNRS PITLFMATLG LSYMLEGFAQ ALWGAQVHGL
DLGIGDEPLE IGGLLLSQFD LFAAGTAAVL VAVLSLLFNK TRIGLSLRAV ADDPLAALAL
GIRLQRIWAV VWAVAGFVGL VAGLLWGARL GVQFSLSLVV LKALPVLIIG GFTSIGGAIA
GGLIVGASEK LAEVYLGPFV GGGIENWFPY VLALLFLLVR PAGLFGERAI ERV