Gene Avin_43440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43440 
SymbolpirA 
ID7763217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp4387449 
End bp4388138 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID643807199 
ProductPirin-like, pirA 
Protein accessionYP_002801440 
Protein GI226946367 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.277134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTC TGCGCCCGGC AGACGAACGT GGACACGCCA ATCTCGGCTG GCTGGACAGC 
CACCACAGCT TTTCCTTCGC CGACTATTAC GACCCGCGCC ACATGGGCGT CTCGCAACTG 
CGGGTGATCA ACGACGACCG CGTCGCGCCG CGGAGCGGCT TCGACGCCCA CCCGCACCGC 
GACATGGAAA TCGTCACCTA CATGCTGGAA GGCACCGTCG AGCACAAGGA CAGCATGGGC 
AACAGCAGTC GCCTGCGGGC CGGGGAAGTC CAGGTGATGA GCGCCGGCAG CGGCGTCGTG 
CACAGCGAGT ACAACCCGTC CGCCAGCGAG CCGCTGCACC TTCTGCAGAT CTGGATCCAG 
CCCCGGGAAA GCCGGGTGCC GCCGCGCTAT GCGCAGAAGG ACTTTTCCAA CCTGCGCGGG 
CTCGGCCTGC TGGTCTCGCC GGACGGCCGC GAGGGCTCGC TGCCGATCCG CCAGGACGCC 
TGCCTGTACC TGGCCCGCCT GGACGACCGG CAGCGGACCA GCCAGCCGGC CCGCACCGGG 
CGCACCTACT ACCTGCACGT CGCCAGCGGC AGCCTGCAGG TCAACGGCGT GTCCCTGGCG 
GCCGGCGACG GCGCCACGCT GGTCGACGAG CCGGCCATCG AACTGGAGGC CCGCGACAAG 
ACCGAGGCGC TGCTGTTCGA CCTGCCCTGA
 
Protein sequence
MITLRPADER GHANLGWLDS HHSFSFADYY DPRHMGVSQL RVINDDRVAP RSGFDAHPHR 
DMEIVTYMLE GTVEHKDSMG NSSRLRAGEV QVMSAGSGVV HSEYNPSASE PLHLLQIWIQ 
PRESRVPPRY AQKDFSNLRG LGLLVSPDGR EGSLPIRQDA CLYLARLDDR QRTSQPARTG 
RTYYLHVASG SLQVNGVSLA AGDGATLVDE PAIELEARDK TEALLFDLP