Gene Avin_43420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43420 
SymbolgarR 
ID7763215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4386245 
End bp4387135 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID643807197 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_002801438 
Protein GI226946365 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.164862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGA TCGGATTCAT CGGCACCGGG ATCATGGGCA AGCCGATGGC CCTCAACCTG 
CGCAAGGCGG ATCACGACCT GGTTCTCTCC AGGCACCACG GCGAGCCGCC CGCCGAACTG
CTGGAAAACG GCGCCGTCGT CCTGGCCAAC CCGCGCGAGG TGGCCCGCGA GGCCGAGTTC
ATCATCGTCA TGGTCCCGGA CACGCCGCAC GTCGAGGACG TGCTGTTCGG CAAGGACGGC
GTGGCCGAGG GCGTCGGCAG CGGCAAGGTG GTGATCGACA TGAGCTCCAT CTCCCCCACC
GCCACCAAGG TCTTCGCCGA GAAGATCAGG GCCACCGGCG CCGCCTACCT GGACGCGCCG
GTGTCTGGCG GCGAGGTGGG CGCCAAGGCC GCGACCCTGA GCATCATGGT CGGCGGCTGC
CTGGACGCCT TCGAGCGCGC CCTGCCGCTG TTCCAGGCCA TGGGCAAGAA CATCACCCGC
GTGGGTTCCA ACGGCGACGG CCAGACCGCC AAGGTGGCCA ACCAGATCAT CGTCGCCCTG
AACATCCAGG CCGTCGCCGA AGCCCTGCTG TTCGCCGCCC GCAACGGCGC CGATCCGGCC
AGGGTACGCG AGGCCCTGAT GGGCGGCTTC GCCGGCTCGA AGATCCTCGA AGTCCACGGC
GAGCGCATGA TCAAGGGCAC CTTCGATCCG GGCTTCCGCA TCAACCTGCA CCAGAAGGAC
CTGAACCTGG CGCTGTCCGG CGCCCGCGAA CTGGGCCTGA ACCTGCCGAA CACCGCCAGC
GCCCAGCAGG TATTCAGCAC CTGCGTGGCC CTCGGCGGCG GCGACTGGGA CCACTCGGCG
CTGATCAAGG GCCTGGAACA CATGGGCAAC TTCTCGATCC GGGAAGAATA A
 
Protein sequence
MAKIGFIGTG IMGKPMALNL RKADHDLVLS RHHGEPPAEL LENGAVVLAN PREVAREAEF 
IIVMVPDTPH VEDVLFGKDG VAEGVGSGKV VIDMSSISPT ATKVFAEKIR ATGAAYLDAP
VSGGEVGAKA ATLSIMVGGC LDAFERALPL FQAMGKNITR VGSNGDGQTA KVANQIIVAL
NIQAVAEALL FAARNGADPA RVREALMGGF AGSKILEVHG ERMIKGTFDP GFRINLHQKD
LNLALSGARE LGLNLPNTAS AQQVFSTCVA LGGGDWDHSA LIKGLEHMGN FSIREE