Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_43420 |
Symbol | garR |
ID | 7763215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4386245 |
End bp | 4387135 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643807197 |
Product | 2-hydroxy-3-oxopropionate reductase |
Protein accession | YP_002801438 |
Protein GI | 226946365 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.164862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGA TCGGATTCAT CGGCACCGGG ATCATGGGCA AGCCGATGGC CCTCAACCTG CGCAAGGCGG ATCACGACCT GGTTCTCTCC AGGCACCACG GCGAGCCGCC CGCCGAACTG CTGGAAAACG GCGCCGTCGT CCTGGCCAAC CCGCGCGAGG TGGCCCGCGA GGCCGAGTTC ATCATCGTCA TGGTCCCGGA CACGCCGCAC GTCGAGGACG TGCTGTTCGG CAAGGACGGC GTGGCCGAGG GCGTCGGCAG CGGCAAGGTG GTGATCGACA TGAGCTCCAT CTCCCCCACC GCCACCAAGG TCTTCGCCGA GAAGATCAGG GCCACCGGCG CCGCCTACCT GGACGCGCCG GTGTCTGGCG GCGAGGTGGG CGCCAAGGCC GCGACCCTGA GCATCATGGT CGGCGGCTGC CTGGACGCCT TCGAGCGCGC CCTGCCGCTG TTCCAGGCCA TGGGCAAGAA CATCACCCGC GTGGGTTCCA ACGGCGACGG CCAGACCGCC AAGGTGGCCA ACCAGATCAT CGTCGCCCTG AACATCCAGG CCGTCGCCGA AGCCCTGCTG TTCGCCGCCC GCAACGGCGC CGATCCGGCC AGGGTACGCG AGGCCCTGAT GGGCGGCTTC GCCGGCTCGA AGATCCTCGA AGTCCACGGC GAGCGCATGA TCAAGGGCAC CTTCGATCCG GGCTTCCGCA TCAACCTGCA CCAGAAGGAC CTGAACCTGG CGCTGTCCGG CGCCCGCGAA CTGGGCCTGA ACCTGCCGAA CACCGCCAGC GCCCAGCAGG TATTCAGCAC CTGCGTGGCC CTCGGCGGCG GCGACTGGGA CCACTCGGCG CTGATCAAGG GCCTGGAACA CATGGGCAAC TTCTCGATCC GGGAAGAATA A
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Protein sequence | MAKIGFIGTG IMGKPMALNL RKADHDLVLS RHHGEPPAEL LENGAVVLAN PREVAREAEF IIVMVPDTPH VEDVLFGKDG VAEGVGSGKV VIDMSSISPT ATKVFAEKIR ATGAAYLDAP VSGGEVGAKA ATLSIMVGGC LDAFERALPL FQAMGKNITR VGSNGDGQTA KVANQIIVAL NIQAVAEALL FAARNGADPA RVREALMGGF AGSKILEVHG ERMIKGTFDP GFRINLHQKD LNLALSGARE LGLNLPNTAS AQQVFSTCVA LGGGDWDHSA LIKGLEHMGN FSIREE
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