| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_43340 |
|---|
| Symbol | glcC |
|---|
| ID | 7763207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4376612 |
|---|
| End bp | 4377391 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643807189 |
|---|
| Product | DNA-binding transcriptional regulator GlcC |
|---|
| Protein accession | YP_002801430 |
|---|
| Protein GI | 226946357 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.180109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTG AGAGTGGCGG GGCTCAGAAG GGGCGGCGGA TCGCCGATCA GGTAGCGGAG
CGCATCGAGC GCCTGATCGT CGACGGAGTG CTGAAGAAGG GGCAGGCATT GCCCTCGGAA
CGGCGGCTGG TGGAAAAGCT GGGCTGTTCG CGCTCGGCCT TGCGGGAGGG ACTGCGCATA
TTGCGCGGGC GCGGGATCAT CGATACCGAA CAGGGGCGTG GCTCGTTCGT GGCGGATCTG
AACCGCGCCA CCGACGCCTC GCCGCTGATG CATCTGTTCA GTTCCCAGTC GCGCACGCTC
TACGACCTGC TGGAGGTGCG CTCGCTGCTC GAAGGCGAGT CGGCCCGGCT CGCCGCGCTA
CGAGCGACCG ACGCGGACCT GATCCTGCTC AAGCGCCGCT ACGAGGAAAT GCTCGCCCTC
GACGACGAGC CCCAGCCATC CGATCCGCGC GAGCACGCAC GCCGGGACCA TGCGTTCCAC
CTGGCGATCA GCGAGGCTTC GCACAACCCG ATACTGGTGC ATACGCTGCA GTCGCTCAGC
GAACTGATGC TGAGCACGGT GTTCGCCTCG GTGAACAATC TCTACCACCG GCCGCTGCAG
AAGCGGCAGA TCGACCGGCA GCACGCGCGT CTCTACAACG CGGTCTGCGA GCACCAGCCG
AGCCAGGCGC AGCGCGCCGC CCGCGACCAT ATCCACAGCC TTCGCGACAG CCTCAAGGAG
ATCGAGCAGG AGGAGCAGCG CCTGGTGCGG GCGACGATGC GTCTGGAGGG CTGGAACTAG
|
|---|
| Protein sequence | MSGESGGAQK GRRIADQVAE RIERLIVDGV LKKGQALPSE RRLVEKLGCS RSALREGLRI
LRGRGIIDTE QGRGSFVADL NRATDASPLM HLFSSQSRTL YDLLEVRSLL EGESARLAAL
RATDADLILL KRRYEEMLAL DDEPQPSDPR EHARRDHAFH LAISEASHNP ILVHTLQSLS
ELMLSTVFAS VNNLYHRPLQ KRQIDRQHAR LYNAVCEHQP SQAQRAARDH IHSLRDSLKE
IEQEEQRLVR ATMRLEGWN
|
|---|
| |