| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_43120 |
|---|
| Symbol | |
|---|
| ID | 7763185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4353318 |
|---|
| End bp | 4355810 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643807167 |
|---|
| Product | periplasmic sensory histidine protein kinase |
|---|
| Protein accession | YP_002801408 |
|---|
| Protein GI | 226946335 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCCAGT GGCTCTGGCG CGCCTTCATA CAGTGCGCCC TGATTCCCTT GCTATTGGTG
GAAGTCGTGC TGGTCGGCGC CTATTTGCTG AGCAATGCCG CCATGCGCGA TGCTCAACTC
GGGCATCTGG AAGAACGGGT GGAGCAGGGA CTGGCCGATA CCCTGCAGCG CGAGGCGAAG
ATCATCGATC GGGATCTGCA GGAGATAGCG CGGCAGACGA GGATCTTTTG CGGCGCCGTC
GCCCATGCCC TGCAGGAGCG CGGCTTCCGG CCGGATGCCG TGGAGCGGGC CAGGCACGTG
GTCGGCCCGA ACGGGCTGTT CTACAGTCGC AACGGCGAGG GGCGCGCGGC TTCGTTCTAT
GTGAAGGACA CGCCGCCCGA GCGCCAGGAT CACGCCAAGG CCCTGCGTCT GTCGCGTCTC
GACGGGCTGA TGCGCTCGAT CGAGGAGGCC GGCCCGCCGG TGATCGCGGT CCATTTCCGT
AGCCGGGATG GCTATATCCG CAGCTATCCG TTCTTTGATG TGCTGCAGCG GGATCTCGGC
GACAGGCCGT CTCCCGGATA CGGCTTCTAT TCGCGTGCCG ACGAGACCCG CAACCCGACA
CGCGAGCCGC TGTGGACCGC GCCCTATCGT GATGAGGACG GGCGCTGGCG GGTATCCTCG
ATCGCTCCGG TCTATCACGG CGATTTCCTG GAAGGCGTGG TCGGCCTGGA GATCGATCTC
GAGCACCTGC TCGCCGACAT CGGCGATCTG GGTGTGCCCT GGCAGGGGCA CGCTATGCTG
GTCGACGAGA GTGGCAACGT CATGCTCCTG CCGGGACAGC GCGGGGCTTC GGGCGATTCC
GTGGTCAATG CGCCACGCTA TCTGCGCGAG GTGGGGCTCC TGCTGCCGGC GGCCGGAGCC
GAAGGGGAGA TACGCTCGGC GCTGTTCGAC GGACGCGAGC ATCTGCTGGC CTGGAGGGGG
ATTTCCCAGG CCGGCTGGCG CCTGCTGCTG GTCGTGGACA AGAGTCGGCT TCTCCAACCG
ACTCGTGCCC TGGCTGCCCA CTACCAGAAG ATGGGCTATC TGCTGATCGC CGGCCTGATA
CTGTTCCATG CGTTGTTCCT GGGGCTCTGG TGGCGCCGTT CGCGTCGTCT GAGCCGCGAA
CTCGAGCAGC CGATCAACGG CATCGTCGAA ATGCTGCGGC ACTCGGGTCG GGACCAGTGG
CAGGCGGGAG ACGGGCCGCT TTCGCCGCTG CGTACCAGCC GGATCGAAGA ACTGAACGCG
ATGGCCAATG CGGTGCGCAG CAGCGATCGC CAATTGCAGG CCAGCGAGGC AGAGCGCTCC
AGAGCCCAGC GCCTGCTGGA GGTAGTGATG GAGCACACCA CCGAGAGCCT TTGGGAAATC
GTCGCGGAAA AGAGTCTGAT CCGGGTGAGC AGCCGTTTCG CCCGGCGTTT CGCCCTGGAC
TCCGAGTGCG TGCCTCTCGA GGTGTTCAAC CGGCTGGTCC ATCCGGACGA CATGGAGCGC
CTCAGGCAGC GTCGCGAGAG TTTCTTCAGC GGCATGGACG GGGTCTACGA GGTGGAATAC
CGCTGTATCG ACCGCGCCGG CCAGTACGTC TGGCTGCTGT CCCGTGGCCA GGCGCTGGAG
TGGGACGCTC GTGGCCGGGT GCTGCGTTCG GCGGGTACCC ATGTGGACAT TTCCCGGCTG
AAGGCGGTGG AGGGGGATCT GCGGCGCGCC ACCCTGGAAG CCCAGGATGC CAGCCGGGCG
AAGAGTCGCT TCCTGTCCAG CATGAGCCAC GAGCTGCGCA CGCCGTTGAA CGCGGTGCAA
GGCTTCGCCC AGTTGATCGA ACTGGAGGTG GAGGGCAAGC CCGACTCGGG CCCGATCGGC
GAATATGCCC GGGAAATCGT CAAGGCCAGC CGGCATCTCA CCGCGCTGGT GGACGATATC
CTCGATCTCT CCACGCTGGA GGGGCGTCGT CAGCAATTGC ATATCCGGCC GGTCGAGGTC
GGCGCCATGC TGGCCGGTTG CGCCGAACTG GTCCAGCCGC ATATCCGCGA ACGTCAGTTG
CAACTGCAAC TGATACCCAT GTGCCGGCCC CTCTACGTAC AGGCCGACTC CCGCCGCCTG
CAGCAGATTC TGCTGAACCT GCTGTCCAAT GCGATCAAGT ACAACTGCCC GCAGGGCCGC
ATCACGCTCG GCTACGAGGT GCGTTCGGAC TGTGTGCGGA TCTGGGTCAA GGACACCGGA
CCGGGGCTCG ATGCCGAGCA GCAGAGCCAG TTGTTCCAGC CTTTCCAGCG TCTCGGCCGG
GAAAGCTCGA ACATTCCGGG GTCCGGTATC GGTCTGGTGC TGTGCCACGA GCTGGCGAGC
ATGATGAACG GCAGCATGGG CTTCTACAGC GAGCCCGGAC ACGGTTGCCG CTTCTGGATC
GATCTGCCGG GGGCGGCGCC GCCCGAGGAT CAGCGGATGC CGTCCGGCGG ACCGCCGACC
GGGCAGGCCG AGCGGGTCGA GGACGACTCC TGA
|
|---|
| Protein sequence | MRQWLWRAFI QCALIPLLLV EVVLVGAYLL SNAAMRDAQL GHLEERVEQG LADTLQREAK
IIDRDLQEIA RQTRIFCGAV AHALQERGFR PDAVERARHV VGPNGLFYSR NGEGRAASFY
VKDTPPERQD HAKALRLSRL DGLMRSIEEA GPPVIAVHFR SRDGYIRSYP FFDVLQRDLG
DRPSPGYGFY SRADETRNPT REPLWTAPYR DEDGRWRVSS IAPVYHGDFL EGVVGLEIDL
EHLLADIGDL GVPWQGHAML VDESGNVMLL PGQRGASGDS VVNAPRYLRE VGLLLPAAGA
EGEIRSALFD GREHLLAWRG ISQAGWRLLL VVDKSRLLQP TRALAAHYQK MGYLLIAGLI
LFHALFLGLW WRRSRRLSRE LEQPINGIVE MLRHSGRDQW QAGDGPLSPL RTSRIEELNA
MANAVRSSDR QLQASEAERS RAQRLLEVVM EHTTESLWEI VAEKSLIRVS SRFARRFALD
SECVPLEVFN RLVHPDDMER LRQRRESFFS GMDGVYEVEY RCIDRAGQYV WLLSRGQALE
WDARGRVLRS AGTHVDISRL KAVEGDLRRA TLEAQDASRA KSRFLSSMSH ELRTPLNAVQ
GFAQLIELEV EGKPDSGPIG EYAREIVKAS RHLTALVDDI LDLSTLEGRR QQLHIRPVEV
GAMLAGCAEL VQPHIRERQL QLQLIPMCRP LYVQADSRRL QQILLNLLSN AIKYNCPQGR
ITLGYEVRSD CVRIWVKDTG PGLDAEQQSQ LFQPFQRLGR ESSNIPGSGI GLVLCHELAS
MMNGSMGFYS EPGHGCRFWI DLPGAAPPED QRMPSGGPPT GQAERVEDDS
|
|---|
| |