Gene Avin_43100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43100 
Symbol 
ID7763183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp4349797 
End bp4350468 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID643807165 
Producthypothetical protein 
Protein accessionYP_002801406 
Protein GI226946333 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.110434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCCA AAGCCAATAT CCTCGCCAAG TTGAGAAAAA GCCTCGAAGG CACCGCGCCG 
GTGGCCGACG ACTACGACGC GGACCTGGTG ACCCGGCCTT GGAGCTACCC GGCCGCCGAA 
CGCATCCCGC GCCTGCGCCA ACTGATGGAA GCGGTGCACA CCGAAACCCA CCTGACCACC 
ACGGCCGACT GGCCGGCGCT GCTGGAAAAG CTGCTGGCCG ACAAACAACT GCCCAGCCTG 
CTGATCGCCC CGGCCACCGC CCACGGTGCG CAGCTCGCCG CGCATTTCGC CGGACGCGAG 
GGCCTGCCGC GGCTCAAGGC CTACGACCGG CCGATCGAGG AATGGAAGGC CGAGCTGTTC 
GACGACACCC CGGCCAGCCT GACCGGCAGC CTCGGCGCCA TCGCCGCCAC CGGCAGCCTG 
ATCCTCTGGC CGACCCGCGA GGAGCCGCGC CTCATGAGCC TGGTGCCACC GGTACACTTC 
GCTCTGCTCA AGGCCAGCGA GGTCTACGAC AACTTCCTCG AGGTGCAGCG GAAACAGCAG 
TGGGCGGCCG GCATGCCGAC CAACGCCCTG CTGGTCTCCG GCCCGTCGAA GACCGCCGAT 
ATCGAGCAGG TGCTGGCCTA CGGCGCCCAC GGGCCCAAGG ATCTGGTCGT GTTGATCCTG 
GAGGATGCAT GA
 
Protein sequence
MSAKANILAK LRKSLEGTAP VADDYDADLV TRPWSYPAAE RIPRLRQLME AVHTETHLTT 
TADWPALLEK LLADKQLPSL LIAPATAHGA QLAAHFAGRE GLPRLKAYDR PIEEWKAELF 
DDTPASLTGS LGAIAATGSL ILWPTREEPR LMSLVPPVHF ALLKASEVYD NFLEVQRKQQ 
WAAGMPTNAL LVSGPSKTAD IEQVLAYGAH GPKDLVVLIL EDA