Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_43050 |
Symbol | smpB |
ID | 7763178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4344046 |
End bp | 4344528 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643807160 |
Product | SsrA-binding protein |
Protein accession | YP_002801401 |
Protein GI | 226946328 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.490843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGC AAAAGAAACA CCCTCAGGGC AACATCGCGC AAAACAAGAA GGCGCTGCAC GATTATTTCA TCGAACAGAA GTTCGAGGCC GGCCTGGCCC TGTCCGGCTG GGAAGTGAAG AGCCTGCGCG CCGGCAAGGC ACAACTGGTC GACAGCTACG TGCTGCTCAA GGATGGCGAG GCCTGGCTGA TGGGCAGCCA TATCACGCCC CTGAAGACGG CCAGCACCCA TGTGATCGCC GACCCCACCC GTACCCGCAA GCTGCTGCTG CACAAGCGCG AGCTCGGCAG GCTGTTCGGC TCCGTCCAGC AGAAAGGCTA CGCCTGCGTC GCCCTCTCGC TGTACTGGAA GAAACATCTG ATCAAGTGCG AGATCGCCCT GGCCAAGGGC AAGAAGGAAT ACGACAAGCG CGACACCGAG AAGGCCCGGG ACTCCGACCG GGAAATCCAG CGCGCCATAC GCAGCAAGGG CAAGGAAGAC TGA
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Protein sequence | MAKQKKHPQG NIAQNKKALH DYFIEQKFEA GLALSGWEVK SLRAGKAQLV DSYVLLKDGE AWLMGSHITP LKTASTHVIA DPTRTRKLLL HKRELGRLFG SVQQKGYACV ALSLYWKKHL IKCEIALAKG KKEYDKRDTE KARDSDREIQ RAIRSKGKED
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