Gene Avin_43050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43050 
SymbolsmpB 
ID7763178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4344046 
End bp4344528 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID643807160 
ProductSsrA-binding protein 
Protein accessionYP_002801401 
Protein GI226946328 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.490843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGC AAAAGAAACA CCCTCAGGGC AACATCGCGC AAAACAAGAA GGCGCTGCAC 
GATTATTTCA TCGAACAGAA GTTCGAGGCC GGCCTGGCCC TGTCCGGCTG GGAAGTGAAG
AGCCTGCGCG CCGGCAAGGC ACAACTGGTC GACAGCTACG TGCTGCTCAA GGATGGCGAG
GCCTGGCTGA TGGGCAGCCA TATCACGCCC CTGAAGACGG CCAGCACCCA TGTGATCGCC
GACCCCACCC GTACCCGCAA GCTGCTGCTG CACAAGCGCG AGCTCGGCAG GCTGTTCGGC
TCCGTCCAGC AGAAAGGCTA CGCCTGCGTC GCCCTCTCGC TGTACTGGAA GAAACATCTG
ATCAAGTGCG AGATCGCCCT GGCCAAGGGC AAGAAGGAAT ACGACAAGCG CGACACCGAG
AAGGCCCGGG ACTCCGACCG GGAAATCCAG CGCGCCATAC GCAGCAAGGG CAAGGAAGAC
TGA
 
Protein sequence
MAKQKKHPQG NIAQNKKALH DYFIEQKFEA GLALSGWEVK SLRAGKAQLV DSYVLLKDGE 
AWLMGSHITP LKTASTHVIA DPTRTRKLLL HKRELGRLFG SVQQKGYACV ALSLYWKKHL
IKCEIALAKG KKEYDKRDTE KARDSDREIQ RAIRSKGKED