Gene Avin_42970 details

Gene Information

• Locus tag: Avin_42970
• Symbol: dnaK
• ID: 7763171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4337462
• End bp: 4339390
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643807153
• Product: molecular chaperone DnaK
• Protein accession: YP_002801394
• Protein GI: 226946321
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA TCATCGGTAT CGATCTGGGC ACCACCAACT CCTGCGTGTC CGTGCTGGAA 
AACGGTGTGG CCAAGGTCAT CGAGAACGCG GAGGGCGCAC GCACCACGCC GTCCATCATC 
GCCTATACCA ACGACGGCGA AATCCTGGTC GGCCAGTCGG CCAAGCGCCA GGCGGTGACC 
AACCCGCAGA ACACCCTGTA TGCGGTCAAA CGCCTGATCG GTCGCCGCTT CGAAGAAGAT 
GTGGTGCAGA AGGACATCAA GCTGGTTCCC TACAAGATCG TCAAGGCCGA CAACGGTGAC 
GCCTGGGTCG AGGTGAAGGG CCAGAAGATG GCTCCGCCGC AGATCAGCGC CGAAGTGCTG 
AAGAAGATGA AAAAGACCGC CGAGGACTAT CTCGGCGAGC CGGTCACCGA AGCGGTGATC 
ACCGTGCCGG CCTACTTCAA CGACAGCCAG CGCCAAGCCA CCAAGGATGC CGGTCGCATC 
GCCGGCCTGG ACGTCAAGCG GATCATCAAC GAGCCGACCG CGGCTGCGCT GGCCTATGGC 
ATGGACAAGG CCAAGGGCGA CCACACCATC ATCGTCTACG ACCTGGGTGG CGGTACCTTC 
GACGTTTCCG TGATCGAGAT CGCCGAAGTG GACGGCGAAC ACCAGTTCGA GGTGCTGGCC 
ACCAACGGCG ATACCTTCCT GGGTGGCGAG GACTTCGACA TCCGTCTGAT CGACTATCTC 
GTCGACGAGT TCAAGAAGGA AAGCGGCATC AACCTCAAGG GCGACCCGCT GGCCATGCAG 
CGCCTGAAGG AAGCCGCCGA GAAGGCCAAG ATCGAGCTGT CCTCCAGCCA GCAGACCGAC 
GTCAACCTGC CGTACATCAC CGCCGACCAG ACCGGTCCGA AGCACCTGAA CGTGAAGATC 
TCCCGCGCCA AGCTGGAGTC GTTGGTGGAG GACCTGGTCG AGCGCACCAT CGAGCCGTGC 
CGTATCGCGC TGAAGGACGC CGGCATCGAC GTGGGCAAGA TCGACGAGGT GATCCTGGTC 
GGCGGCCAGA CCCGCATGCC GCTGGTGCAG AAGCGCGTGG CCGAATTCTT CGGCAAGGAG 
CCGCGCAAGG ACGTCAACCC GGACGAAGCC GTGGCCATGG GGGCGGCCAT CCAGGGCGCC 
GTGCTGGCCG GCGACGTCAA GGACGTGCTG CTGCTCGACG TCTCGCCGCT GACCCTGGGC 
ATCGAGACCC TCGGCGGCGT GATGACCGCG CTGATCGAGA AGAACACCAC CATCCCGACC 
AAGAAGTCGC AGGTGTTTTC CACTGCGGAC GACAACCAGA GCGCTGTCAC CATTCACGTG 
CTGCAGGGCG AGCGCAAGCA GGCCGGGCAG AACAAGTCGC TGGGTCGCTT CGACCTGGCC 
GACATTCCGC CGGCGCCGCG CGGCGTGCCG CAGATCGAGG TCACCTTCGA TATCGACGCC 
AACGGCATCC TGCACGTGTC CGCCAAGGAC AAGGCCACCG GCAAGCATCA GTCCATCGTG 
ATCAAGGCCA ACTCCGGTCT GTCCGAGGAG GAGATCCAGA AGATGGTTCG CGATGCCGAG 
GCCAACGCCG AGGAGGATCG CAAGTTCGAG GAGCTGGTTG CCACGCGTAA CCAGGGCGAC 
CAACTGGTGC ATGCCACCCG CAAGATGGTC ACCGAGGCGG GTGACAAGGT CAGCGCGGAC 
GAGAAGGTCG GCATCGAGAA GGCGATCGCC GATCTGGAAG AAGCGCTCAA GGGCGACGAC 
AAGTCCCGGA TCGAGTCCCT GATAAACGCC TTGTCTCAGG CTACCGCGCC GCTGGCGCAG 
AAGATGTATG CCGAACAGGC CGAGCCCGGC GAGGCTGCCG CCCAGGGGGG CGAGAAGGCC 
AAGTCCGCGG CGGACGACGT GGTGGATGCC GAGTTCGAAG AGGTCAAGGA CAGCAAGGGC 
AACAAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVSVLE NGVAKVIENA EGARTTPSII AYTNDGEILV GQSAKRQAVT 
NPQNTLYAVK RLIGRRFEED VVQKDIKLVP YKIVKADNGD AWVEVKGQKM APPQISAEVL 
KKMKKTAEDY LGEPVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAYG 
MDKAKGDHTI IVYDLGGGTF DVSVIEIAEV DGEHQFEVLA TNGDTFLGGE DFDIRLIDYL 
VDEFKKESGI NLKGDPLAMQ RLKEAAEKAK IELSSSQQTD VNLPYITADQ TGPKHLNVKI 
SRAKLESLVE DLVERTIEPC RIALKDAGID VGKIDEVILV GGQTRMPLVQ KRVAEFFGKE 
PRKDVNPDEA VAMGAAIQGA VLAGDVKDVL LLDVSPLTLG IETLGGVMTA LIEKNTTIPT 
KKSQVFSTAD DNQSAVTIHV LQGERKQAGQ NKSLGRFDLA DIPPAPRGVP QIEVTFDIDA 
NGILHVSAKD KATGKHQSIV IKANSGLSEE EIQKMVRDAE ANAEEDRKFE ELVATRNQGD 
QLVHATRKMV TEAGDKVSAD EKVGIEKAIA DLEEALKGDD KSRIESLINA LSQATAPLAQ 
KMYAEQAEPG EAAAQGGEKA KSAADDVVDA EFEEVKDSKG NK