Gene Avin_42960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42960 
SymboldnaJ 
ID7763170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4336218 
End bp4337345 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID643807152 
Productchaperone protein DnaJ 
Protein accessionYP_002801393 
Protein GI226946320 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGC GTGATTATTA CGAGGTGCTG GGGGTCGAGC GGGGAGCCGG CGAGGCGGAG 
CTGAAGAAGG CTTACCGCCG TCTGGCGATG AAGTACCACC CCGATCGAAA TCCCGACGAC
AAGTCGGCCG AGGAGAAATT CAAGGAGGTC AACGAGGCCT ATGAGGTGCT CTCCGATGCC
GGCAAGCGAA TGGCCTACGA CCAGTACGGC CATGCCGGGG TCGACCAGAG CATGGGCGGG
GGGGCTGGCT TCGGTGCCGG TGGAGCCAAT TTCTCCGATA TTTTCGGCGA TGTGTTCAGC
GACTTCTTCG GGGCTGGGCG CGCTGGCGCC CGTGGTGGTC CGCAGCGCGG CAGCGACCTG
CGCTACACCC TGGAACTCAA CCTGGAAGAG GCTGTTCGCG GCACGACGGT GACCATCCGG
GTGCCGACCC TGGTGCACTG CAAGACCTGC GACGGCAGCG GCGCGAAGAA GGGCACCACG
CCGGTCACCT GTACGACCTG CGGCGGCATC GGGCAGGTGC GCATGCAGCA GGGCTTTTTC
TCGGTACAGC AGACCTGCCC GCGCTGCCAC GGCAGCGGCA AGATGATTGC CGATCCCTGT
CCGGACTGCC ATGGCCAGGG GCGTGTGGAG GAGCACAAGA CTCTGTCGGT GAAGGTGCCG
GCCGGGGTCG ACAGCGGCGA TCGCATCCGC CTGGCCGGCG AAGGCGAGGC GGGTACCCTG
GGCGGGCCGC CCGGCGATCT CTATGTGGTG GTCAGTGTCC GCGAGCACCC GATCTTCCAG
CGCGACGGCA AGCATCTGTA CTGCGAGGTG CCGATCAGCT TCGCCGATGC GGCGCTCGGT
GGCGAACTGG AGGTGCCGAC CCTGGATGGC CGGGTCAAGC TGAAGATTCC GGAGGGCACC
CAGACCGGCA AGCTGTTCCG TCTGCGTGGC AAGGGCGTGG CGCCGGTGCG CGGCGGTGCG
GCTGGCGACC TGATGTGCCG GGTGGTGGTG GAGACGCCGG TCAATCTGAG CAAGCGCCAG
CGCGAGCTGC TCGAGGAGTT CCGTGGCAGT CTGCAGGGCA ACAGCAGCCA TTCGCCAAAG
GCCAGCGGCT GGTTCGAGGG CATGAAGCGC TTTTTCGACG ATTTGTGA
 
Protein sequence
MAKRDYYEVL GVERGAGEAE LKKAYRRLAM KYHPDRNPDD KSAEEKFKEV NEAYEVLSDA 
GKRMAYDQYG HAGVDQSMGG GAGFGAGGAN FSDIFGDVFS DFFGAGRAGA RGGPQRGSDL
RYTLELNLEE AVRGTTVTIR VPTLVHCKTC DGSGAKKGTT PVTCTTCGGI GQVRMQQGFF
SVQQTCPRCH GSGKMIADPC PDCHGQGRVE EHKTLSVKVP AGVDSGDRIR LAGEGEAGTL
GGPPGDLYVV VSVREHPIFQ RDGKHLYCEV PISFADAALG GELEVPTLDG RVKLKIPEGT
QTGKLFRLRG KGVAPVRGGA AGDLMCRVVV ETPVNLSKRQ RELLEEFRGS LQGNSSHSPK
ASGWFEGMKR FFDDL