Gene Avin_42920 details

Gene Information

• Locus tag: Avin_42920
• Symbol: greA
• ID: 7763166
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4330282
• End bp: 4330758
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643807148
• Product: transcription elongation factor GreA
• Protein accession: YP_002801389
• Protein GI: 226946316
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.393679
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAT TTCCAATGAC TGTCCAGGGC GCGCGCGCGC TGGAGGAAGA ACTCAAGCAT 
CTGAAAACCG AGCTGCGCCC GCAGATCACC CAGGCGATCG CCGAGGCGCG CGAACTGGGC 
GACCTCAAGG AGAATGCCGA ATACCATGCC GCCCGGGAAC AGCAGGGTAT GGTCGAGGCA 
CGAATCCGTG ATATCGAAGG CCGTCTGCAG AATGCGCAGG TCATCGATGT GACCGCCATT 
CCCCATACCG GGAAGGTGAT TTTCGGTGTC ACCGTGGAGA TCGCCAACGT CGAAACCGAC 
GAAACCGTGG TCTACCAGAT CGTGGGTGAC GATGAGGCCG ACATCAAGCA GGGCAAGCTG 
TCGGTCAGTT CGCCCATCGC TCGCGCCCTG GTGGGCAAGG AGGAGGGCGA TGTGGCGGCG 
GTCAAGACGC CGAGCGGTAC CGTCGAGTAC GAGATCATCG AGGTCCGCCA CGTCTGA 

 

Protein sequence

MTKFPMTVQG ARALEEELKH LKTELRPQIT QAIAEARELG DLKENAEYHA AREQQGMVEA 
RIRDIEGRLQ NAQVIDVTAI PHTGKVIFGV TVEIANVETD ETVVYQIVGD DEADIKQGKL 
SVSSPIARAL VGKEEGDVAA VKTPSGTVEY EIIEVRHV