Gene Avin_42890 details

Gene Information

• Locus tag: Avin_42890
• Symbol: ftsH1
• ID: 7763163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 4327033
• End bp: 4328946
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643807145
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002801386
• Protein GI: 226946313
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA ACCTGATTCT GTGGTTGATC ATCGCGGCCG TTCTGGTGAC CGTGATGAAC 
AACTTTACCA ATCCTAGCGA GCCGCAGACG CTGAATTATT CGGACTTCAT CCAGCAGGTC 
AAGGATGGCA AGGTCGAGCG CGTGACCGTG GATGGCTACA TCATCACCGG CCAGCGGATA 
GACGGCGACA ATTTCAAGAC GATCCGTCCG GCCATCCAGG ATGGCGGTCT GATCGGCGAT 
CTGATCGACA ACAACGTCCA GATCGAGGGC AAGCAACCGG AGCAGCAGAG CATCTGGTCG 
CAGTTGCTGG TGGCCAGTTT TCCGATCCTG GTGATCATCG CCGTGTTCAT GTTCTTCATG 
CGCCAGATGC AGGGTGGTGC GGGTGGCAAG GGCGGGCCGA TGAGTTTTGG CAAGAGCAAG 
GCACGCCTGC TCTCGGAGGA CCAGGTCAAG ACCACCTTCG CCGATGTCGC CGGTTGTGAC 
GAAGCCAAGG AGGAGGTCAG CGAACTGGTC GAGTTTCTGC GTGATCCGGG CAAGTTCCAG 
CGTCTCGGCG GGCGCATTCC CCGCGGCGTG CTGATGGTCG GCCCGCCCGG TACCGGCAAG 
ACGCTGCTGG CCAAGGCGAT CGCCGGCGAG GCCAAGGTTC CGTTCTTCAC CATTTCCGGT 
TCGGACTTCG TCGAAATGTT CGTCGGGGTA GGCGCCTCGC GCGTACGGGA CATGTTCGAT 
CAGGCGAAGA AACATGCTCC CTGCATCATC TTCATCGACG AGATCGACGC CGTCGGTCGG 
CACCGTGGCG CCGGGCTCGG CGGCGGTCAC GACGAGCGGG AGCAGACCCT CAACCAGTTG 
CTGGTGGAGA TGGATGGCTT CGAGATGAAC GATGGCATTA TCGTCATCGC GGCGACCAAC 
CGTCCCGATG TGCTCGATCC GGCGCTGCTG CGCCCCGGTC GCTTCGACCG CCAGGTGGTG 
GTCGGCCTGC CGGATATCCG TGGTCGCGAA CAGATCCTCA AGGTGCACAT GCGCAAGGTC 
CCGGTGAGCG AGGATGTCAA TCCGGCGGTC ATTGCCCGCG GTACGCCCGG TTTCTCCGGC 
GCCGACCTAG CCAACCTGGT GAACGAGGCC TCGCTGTTCG CCGCGCGGGC CAACAAGCGC 
ATCGTGGAGA TGCGCGAGTT CGAACTGGCC AAGGATAAGA TCATGATGGG CGCCGAGCGC 
AAGACCATGG TCATGTCCGA AAAAGAAAAG CTCAACACGG CCTACCACGA GGCAGGACAC 
GCGATCGTCG GTCGGTTGGT GCCCGAGCAC GATCCCGTCT ACAAGGTGTC GATCATCCCG 
CGTGGACGTG CCTTGGGTGT CACCATGTTC CTGCCGGAGG AGGATCGCTA CAGCCTGTCC 
AAGCGGGCGC TGATCAGCCA GATCTGCTCG TTGTTCGGTG GGCGGATCGC CGAGGAAATG 
ACGCTGGGCT TCGAAGGGGT CACGACCGGT GCGTCCAATG ACATCATGCG CGCCACTCAA 
ATCGCTCGGA ACATGGTGAC CAAGTGGGGC CTGTCGGAAA AGCTGGGGCC GCTGATGTAT 
GCGGAAGAAG AGGGCGAAGT GTTCCTCGGT CGTACGGCTG GAACCCAGCA CTCCAACGTC 
TCGGCGGAAA CCGCCCGGCT GATCGATCAG GAAGTGCGCA GTATCATCGA CCAGTGCTAT 
GCCACGGCTA CCAAGCTGTT GACGGATAGC CGGGACAAGC TGGACATGAT GGCGGAGGCA 
TTGTTGAAGT ATGAAACCAT CGATGCCGAC CAGATCGACG ACATCATGGC AGGGCGCGTG 
GTTCGCGAGC CGAAGGATTG GCAAGGAGGG GGCTCCGGCA CCTCTGGAAC GCCGGCTTCC 
CAAGGGACCA GTCGGCCCGA AGCTCCGATC GGAGGGCCTG CTGGCGAACA TTAA 

 

Protein sequence

MAKNLILWLI IAAVLVTVMN NFTNPSEPQT LNYSDFIQQV KDGKVERVTV DGYIITGQRI 
DGDNFKTIRP AIQDGGLIGD LIDNNVQIEG KQPEQQSIWS QLLVASFPIL VIIAVFMFFM 
RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTFADVAGCD EAKEEVSELV EFLRDPGKFQ 
RLGGRIPRGV LMVGPPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFD 
QAKKHAPCII FIDEIDAVGR HRGAGLGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN 
RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PVSEDVNPAV IARGTPGFSG 
ADLANLVNEA SLFAARANKR IVEMREFELA KDKIMMGAER KTMVMSEKEK LNTAYHEAGH 
AIVGRLVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LFGGRIAEEM 
TLGFEGVTTG ASNDIMRATQ IARNMVTKWG LSEKLGPLMY AEEEGEVFLG RTAGTQHSNV 
SAETARLIDQ EVRSIIDQCY ATATKLLTDS RDKLDMMAEA LLKYETIDAD QIDDIMAGRV 
VREPKDWQGG GSGTSGTPAS QGTSRPEAPI GGPAGEH