Gene Avin_42820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42820 
SymbolinfB 
ID7763157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4319313 
End bp4321823 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content64% 
IMG OID643807137 
Producttranslation initiation factor IF-2 
Protein accessionYP_002801380 
Protein GI226946307 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.914178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG TCACGGTGAA AGAACTGGCC CTGGTGGTCG ATACACCGGT CGAGCGCCTG 
CTGCAGCAGA TGCGTGAGGC AGGCCTGTCG CATACCAGCG CCGAGCAGGT AGTGACCGAC
AATGAGAAGC AGGCCCTGTT GGCTCACCTC AAGGGCAGCC ATGGCGTGAA GCTGGAGGAG
CCGCGCAAGA TCACCTTGCA ACGCAAGACC ACGACTACTT TAAGGGTCGC CGGTAGCAAG
ACCATCAGTG TTGAGGTCCG CAAGAAAAAG ACTTATGTCA AGCGCAGCCC TGACGAACTC
GAGGCCGAGA AGCAGCGCGA GCTCGAGGAG CAGCGTGCCG CCGAGGAGGC CGCTGTGCGC
CAGAAGGCCG GGGAGGAGGC CAGGCGTCGT GCTGCCGAGC AGGAGGCTCA GCGCCAGGCC
GAGGCGGCTG CTGCCGCTGC GGTAGCGGCC AAGGAGCCGG AATCGGCGCT TGGCGTGGCG
CCCGAGCCCG TCGCCGCTCC GCCCGCCAGT GAGGAGCGCA AACGGGAAGA GCCGCGTCGT
GTCGACAAGG AAAAGGTACG CAATGTCGAT GATGAGCGGC GCGAGCGCAA GAACGCCCAG
CATCGTCCCT CCATCAAGGA CAAGGCGCCG GCTGCCCGTG CGGTGGTACG CAGTGTCGAC
GAAGACGGTG AAGGTTTCGG TCGCCGCGGT GGTCGTGGAG GCAAGTCAAA GCTGAAGAAG
CGCAATCAGC ATGGCTTCCA GAACCCGACC GGCCCCGTCG TGCGCGAGGT GACCATCGGT
GAGACCATCA CCGTCGCCGA GCTGGCTCAG CAGATGTCGG TCAAGGCGGC CGAGGTCATC
AAGTTCATGT TCAAGATGGG CACGCCGGTG ACCATCAACC AGGTACTCGA CCAGGAAACC
GCCCAACTGT TGGCCGAGGA GTTGGGGCAC AAGGTCAAGC TGGTCAGCGA GAATGCACTG
GAGGAGCAGT TGGCCGAGTC CCTCAAGTTC GAGGGCGAAG CCGAGGCGCG CGCACCGGTG
GTCACGGTCA TGGGGCACGT CGACCATGGC AAGACCTCGC TGCTTGACTA CATTCGCCGC
ACCAAGGTGG CGACCGGCGA GGCGGGCGGT ATCACCCAGC ACATCGGCGC CTATCATGTG
GAAACCGATC GCGGCATGAT CACCTTCCTC GATACTCCCG GCCATGCCGC GTTTACCGCG
ATGCGTGCCC GGGGCGCCAA GGCCACCGAT ATCGTCATCC TGGTGGTGGC GGCCGACGAC
GGCGTGATGC CGCAGACCGA GGAGGCCATC CAGCATGCCA AGGCGGCCGG TGTGCCGATC
GTCGTGGCGG TGAACAAGAT CGACAAGCCG GAAGCCGATC CGGACCGGGT CAAGAACGAT
CTGGCCGCTC GCGACGTGAT TCCCGAGGAG TGGGGTGGCG ATACCCAGTT CGTCCATGTC
TCGGCGAAGG CCGGTACCGG CATCGACGAA CTGCTCGAGG CCGTGTTGCT GCAGGCCGAG
GTATTGGAGC TGAAGGCCAC GCCGAGCGCT CCGGGTCGTG GAGTGGTGAT CGAGTCGCGC
CTGGACAAGG GGCGCGGTCC GGTGGCGACC GTGCTCGTGC AGAACGGCAC CCTGCGCCAG
GGCGATGTCG TTCTCGCCGG TGTCAACTTC GGCCGTGTGC GGGCGATGCT CGATGAGAAT
GGCCAACCGC TCAAGGAGGC CGGTCCATCG ATTCCGGTGG AGATTCTCGG TCTGGATTCC
ACCCCGGATG CCGGCGACGA ACTGACCGTG GTTACCGACG AGAAGAAGGC CCGTGAAGTG
GCGCTGTTCC GGCAGGGCAA GTTTCGCGAG GTCAAGCTGG CTCGTCAGCA TTCGGCGAAG
CTGGAAAACA TCTTCGAAAC CATGGGGCAG GACGAGAAGA AGACGCTCAA CATCGTCCTC
AAGGCCGACG TGCGCGGCTC GCTGGAGGCC CTGCAGGGTG CCCTGTCCGA GCTTGGCAAC
GAGGAGGTCC AGGTACGCGT GGTAGGCGGT GGCGTCGGTG GTATCACCGA GAGCGATGCC
AACCTGGCGC TGGCTTCCAA TGCCGTGCTG TTCGGCTTCA ACGTGCGCGC CGATGCCGGT
GCACGCAAGA TCGTCGAGCA GGAAGGTCTG GATCTGCGTT ACTACAACGT CATCTACGAC
ATCATCGAGG ACGTCAAGAA GGCCCTGTCG GGCATGTTGG GCAGCGAGGT GCGGGAGAAC
ATCCTGGGCG TCGCGGAGGT ACGCGACGTG TTCCGTTCGC CGAAGTTCGG CGCCATCGCC
GGCTGCATGG TGCTCGAGGG CAACGTTCAT CGCAATCGCC CGATCCGTGT GCTGCGCGAC
GACGTGGTGA TCTTCGAGGG CGAGCTGGAG TCCCTGCGCC GTTTCAAGGA CGACGTGTCC
GAAGTCCGGG CCGGCATGGA GTGCGGTATC GGCGTGAAGA GCTACAACGA CGTCAAGGTC
GGTGACAAGA TCGAAGTGTA CGAGAAGGTC CAGGTGGCGC GTTCGCTCTG A
 
Protein sequence
MTQVTVKELA LVVDTPVERL LQQMREAGLS HTSAEQVVTD NEKQALLAHL KGSHGVKLEE 
PRKITLQRKT TTTLRVAGSK TISVEVRKKK TYVKRSPDEL EAEKQRELEE QRAAEEAAVR
QKAGEEARRR AAEQEAQRQA EAAAAAAVAA KEPESALGVA PEPVAAPPAS EERKREEPRR
VDKEKVRNVD DERRERKNAQ HRPSIKDKAP AARAVVRSVD EDGEGFGRRG GRGGKSKLKK
RNQHGFQNPT GPVVREVTIG ETITVAELAQ QMSVKAAEVI KFMFKMGTPV TINQVLDQET
AQLLAEELGH KVKLVSENAL EEQLAESLKF EGEAEARAPV VTVMGHVDHG KTSLLDYIRR
TKVATGEAGG ITQHIGAYHV ETDRGMITFL DTPGHAAFTA MRARGAKATD IVILVVAADD
GVMPQTEEAI QHAKAAGVPI VVAVNKIDKP EADPDRVKND LAARDVIPEE WGGDTQFVHV
SAKAGTGIDE LLEAVLLQAE VLELKATPSA PGRGVVIESR LDKGRGPVAT VLVQNGTLRQ
GDVVLAGVNF GRVRAMLDEN GQPLKEAGPS IPVEILGLDS TPDAGDELTV VTDEKKAREV
ALFRQGKFRE VKLARQHSAK LENIFETMGQ DEKKTLNIVL KADVRGSLEA LQGALSELGN
EEVQVRVVGG GVGGITESDA NLALASNAVL FGFNVRADAG ARKIVEQEGL DLRYYNVIYD
IIEDVKKALS GMLGSEVREN ILGVAEVRDV FRSPKFGAIA GCMVLEGNVH RNRPIRVLRD
DVVIFEGELE SLRRFKDDVS EVRAGMECGI GVKSYNDVKV GDKIEVYEKV QVARSL