Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_42800 |
Symbol | truB |
ID | 7763155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4317910 |
End bp | 4318827 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643807135 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002801378 |
Protein GI | 226946305 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCAGG GTAAACGTAT CCGCCGCAAG GTCGACGGCA TCCTGGTCCT CGACAAGCCG CATGGACTGA CCTCCAACGC CGCGTTGCAG AAGGTGCGCT GGCTTCTGAA CGCCGAGAAG GCCGGGCATA CCGGTAGCCT CGACCCGTTG GCCACCGGTG TGCTGCCGCT GTGTTTCGGC GAGGCGACCA AGTTTTCCCA GTACCTGCTG GATGCCGACA AGGGTTACGA GACCCTGATG CATCTCGGCG TGACCACGAC TACCGGCGAC GCCGAGGGTG AGGTGCTCGA GCGACGTGCC GTGCAGCTCG GGCGCGATGC GCTGGAGTCG GTACTGGCGG ATTTCCGCGG CGAGATCAGC CAGGTCCCGC CCATGTATTC GGCACTCAAA CGTGACGGGC AGCCGCTCTA CAAGCTGGCC AGGGCCGGCG AGGTGGTGGA GCGCGAGGCG CGTTCTGTTA CTATTGCGCG CCTGGAACTG CTGGCCTTCG AGCCGCCGTT CGCACGGCTG GCGGTGGCTT GCAGCAAGGG CACCTATGTG CGTTCCCTGG TCGAGGACAT CGGCCGGGCG CTCGGATTCG GAGCGCACGT CGCGGAGTTG CGCAGGACCC AGGCCGGACC TTTCGGGCTG GCCCGGACGG TCAGCCTCGC GGCCCTTGAG CAGGCCCATG CCGAAGGTGG CAGCGAGGCG CTCGACCCTT TCCTGCTGCC GGCGGACAGC GGTCTGGAGC ATTGGCCGTT GCTGCAGCTC TCCGAGCACA GCAGCTACTA CTGGCTGCAC GGGCAGCCGG TGCGTGCGCC GCAGTCGCCG AAGTTCGGCA TGGTGCGGGT GCAGGATCAT ACGGGCCGCT TCATCGGTAT CGGTGAAGTG GGCGACGACG GGCGCATCGC GCCGCGTCGA CTGATTCGGT CGGAATGA
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Protein sequence | MTQGKRIRRK VDGILVLDKP HGLTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG EATKFSQYLL DADKGYETLM HLGVTTTTGD AEGEVLERRA VQLGRDALES VLADFRGEIS QVPPMYSALK RDGQPLYKLA RAGEVVEREA RSVTIARLEL LAFEPPFARL AVACSKGTYV RSLVEDIGRA LGFGAHVAEL RRTQAGPFGL ARTVSLAALE QAHAEGGSEA LDPFLLPADS GLEHWPLLQL SEHSSYYWLH GQPVRAPQSP KFGMVRVQDH TGRFIGIGEV GDDGRIAPRR LIRSE
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