Gene Avin_42720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42720 
SymbolpanC 
ID7763147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4306558 
End bp4307409 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID643807127 
Productpantoate--beta-alanine ligase 
Protein accessionYP_002801370 
Protein GI226946297 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.321932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCC TCAAGACCGT CCGCGAACTA CGCGCCGCCA TCGCCCGGGC CCGTGGCGAT 
GGCAAGCGCA TCGCCCTGGT TCCGACCATG GGCAACCTGC ACGCAGGACA CATCGCGCTG
GTAGAGAAGG CCCGCCAGCG TGCCGACTTC GTGGTCGCCA GCATCTTCGT CAATCCCTTG
CAGTTCGGCC CCGCCGAGGA TCTGGACAAG TATCCGCGCA CCCTCGCCGC CGATCAGGAA
AAACTGCTCG AAGGTGGTTG CAACCTGTTG TTCGCCCCCA ACGCCGAGGA GATGTATCCG
GGCGGCATGC AGGGACAGAC GCGCATTTCC GTCCCCGTCG TCTCCGAAGG GCTCTGCGGC
GCCGCGCGCC CCGGCCACTT CGAAGGTGTC GCCACCGTGG TGACCAAGCT GTTCAACATC
GCCCAGCCGG ACATCGCCCT GTTCGGCGAG AAGGACTACC AGCAACTGGC GGTGATCCGC
ACCCTGGTAC GCGACCTCAA CATGCCGATC CAGATCTTCG GCGAACCCAC CGTACGCGCC
GCCGACGGTC TGGCCCTGTC CTCGCGCAAC GGTTACCTGA ACGACGAGCA GCGCAACGTG
GCGCCGGCGC TGTACCGCAT CCTGAGCGAC ATCGGAACGG CCATCCAGGC AGGCGAACAG
GACTTCGCCG GGCTTTGCGC CCGGGGACTG GAGGCGTTGC GCCAAGCCGG TTTCCGTCCC
GACTACCTGG AGATCCGCGA GGCCGCCAGC CTGCGCCCGG CGGCTCCCGG GGACCTTCGG
CTGGTCGTGC TCGCAGCGGC CTATCTGGGC AATACCCGCC TGATCGACAA CCTGAGCGTC
GACATCGCCT GA
 
Protein sequence
MITLKTVREL RAAIARARGD GKRIALVPTM GNLHAGHIAL VEKARQRADF VVASIFVNPL 
QFGPAEDLDK YPRTLAADQE KLLEGGCNLL FAPNAEEMYP GGMQGQTRIS VPVVSEGLCG
AARPGHFEGV ATVVTKLFNI AQPDIALFGE KDYQQLAVIR TLVRDLNMPI QIFGEPTVRA
ADGLALSSRN GYLNDEQRNV APALYRILSD IGTAIQAGEQ DFAGLCARGL EALRQAGFRP
DYLEIREAAS LRPAAPGDLR LVVLAAAYLG NTRLIDNLSV DIA