Gene Avin_42640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42640 
SymboldksA 
ID7763139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4297055 
End bp4297492 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID643807119 
ProductRNA polymerase binding protein DksA 
Protein accessionYP_002801362 
Protein GI226946289 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.105027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCA AAGCAAAACA GAACAACTTG GTTCGCGGTT TCGTACCTTA CCCGGAAACC 
CCGGGCGAGG AATACATGAG CGAGAACATG CGCGCTCATT TCACCAACAT CCTCAACAAG
TGGAAGCAGG AGTTGATGGA AGAGGTCGAC CGCACCGTGC ACCACATGCA GGACGAGGCC
GCCAACTTCC CCGATCCCGC CGACCGGGCC AGTCAGGAAG AGGAGTTCAG CCTGGAACTG
CGTGCCCGTG ACCGTGAACG CAAATTGATC AAGAAGATCG ACGAAACCCT GCAACTGATC
GAGGAAAACG AATACGGCTG GTGCGACTCC TGCGGCGTGG AAATCGGCAT TCGCCGCCTC
GAGGCGCGCC CCACCGCCAC CCTGTGCATC GACTGCAAGA CGCTGGCGGA AATCAAGGAA
AAGCAGATCG GCAGTTGA
 
Protein sequence
MPTKAKQNNL VRGFVPYPET PGEEYMSENM RAHFTNILNK WKQELMEEVD RTVHHMQDEA 
ANFPDPADRA SQEEEFSLEL RARDRERKLI KKIDETLQLI EENEYGWCDS CGVEIGIRRL
EARPTATLCI DCKTLAEIKE KQIGS