| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_42600 |
|---|
| Symbol | |
|---|
| ID | 7763135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4293492 |
|---|
| End bp | 4294535 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643807115 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_002801358 |
|---|
| Protein GI | 226946285 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0785088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCC GCGTTCGCCG TTCCCGCATC CTGCTGCCCG CCCTAGGCCT GTTGCTGCTG
CTCGCCTTCT GGCTGTCGCT GGCGCTGGGA CCGCTGCGGT TGCCCTTGGT CGACTCCCTG
CTGGCTCTGT TGCGCCTGGC CGGGCTGCCC TTGTCCGGGG AGGGGCTCGA GCAGGCCGAA
CTGATCGTCG GGCAGATCCG TCTGCCGAGG ACCCTGCTCG GCCTGGCGGT GGGCAGCGTG
CTGGCGCTGA GCGGGGTGGC GATGCAGGCC CTGTTCCGCA ATCCGTTGGC CGATCCCGGG
CTGATCGGCG TGTCCGGCGG CGCCGCGCTG GGGGCTGCGC TGGCGATCGT CGGCGGCTCG
CTGTCCGGCG CCGGCGAGTC GCCCGAGGCG TCGCCTTACC TGCTATCGGC GAGCGCTTTC
GCCGGGGGGC TGGCGGTGAC CGCGCTGGTC TATCGACTGG GACGGCACGA CGGCCGGACC
CGGGTCGCCA CCATGCTGCT CGCCGGGCTC GCCCTCAGTG CCCTGGCCGG CGCGGCGGTC
GGCCTGTGCG GCTATCTGGC CGACGATGCC GCGCTACGTC GGCTGACCTT CTGGAATCTG
GGCAGCCTGA GCGGCGCCAG CTATGCCCGG CTCTGGCCAC TGCTGCTGGC GACCCTGGGC
GTGGCGCTCT GGCTGCCGCG TCGCGCCGGG GCGCTGAATG CCCTGCTGCT GGGCGAGTCC
GAAGCACGCC ATCTCGGTTT CGACGTGGAG CGGCTGAAGC GCGAACTGGT GTTCTGCACG
GCCCTCGGTG TGGGGGCGGC GGTGGCGGCG GCCGGACTGA TCGGTTTCGT CGGTCTTCTG
GTCCCGCACC TGCTGCGTCT GCTCTGCGGG CCGGATCATC GCCTGCTGCT ACCGGCGGCC
ATGCTCGGCG GCGCCAGCCT GCTGCTGTTC GCCGATCTGC TGGCGCGCCT GTTACTGGCG
CCGGCCGAGC TGCCGCTCGG CATAGTCACG GCGCTGCTCG GCGCGCCTTT CTTCCTCTGG
TTGCTGCGGC GGGAGCCGCT CTGA
|
|---|
| Protein sequence | MSVRVRRSRI LLPALGLLLL LAFWLSLALG PLRLPLVDSL LALLRLAGLP LSGEGLEQAE
LIVGQIRLPR TLLGLAVGSV LALSGVAMQA LFRNPLADPG LIGVSGGAAL GAALAIVGGS
LSGAGESPEA SPYLLSASAF AGGLAVTALV YRLGRHDGRT RVATMLLAGL ALSALAGAAV
GLCGYLADDA ALRRLTFWNL GSLSGASYAR LWPLLLATLG VALWLPRRAG ALNALLLGES
EARHLGFDVE RLKRELVFCT ALGVGAAVAA AGLIGFVGLL VPHLLRLLCG PDHRLLLPAA
MLGGASLLLF ADLLARLLLA PAELPLGIVT ALLGAPFFLW LLRREPL
|
|---|
| |