Gene Avin_42500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42500 
SymbolilvC 
ID7763125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4282351 
End bp4283367 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content56% 
IMG OID643807105 
Productketol-acid reductoisomerase 
Protein accessionYP_002801348 
Protein GI226946275 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGT ATTACGATAA AGATTGCGAC CTTTCCATCA TTCAAAGCAA GAAGGTTGCC 
ATCATCGGTT ACGGTTCCCA AGGCCATGCG CACGCCTGCA ACCTGAAGGA TTCCGGCGTT
GATGTTTACG TCGGCCTGCG CGCCGGTTCC GCTTCGGTAG CCAAGGCTGA GGCTCATGGA
CTGACCGTAA AGAGTGTCAA GGATGCCGTT GCCGCTGCCG ATGTGGTGAT GATTCTGACT
CCTGACGAGT TCCAGGGCCG CTTGTACAAG GATGAGATCG AGCCGAACCT GAAGAAGGGG
GCAACCCTGG CTTTTGCCCA TGGTTTCTCC ATTCACTATA ACCAAGTAGT GCCGCGCGCC
GACCTCGACG TCATCATGAT CGCCCCCAAA GCGCCGGGAC ATACCGTGCG TTCCGAGTTT
GTCCGCGGCG GCGGCATTCC CGATCTGATC GCTGTTTATC AGGATGCTTC CGGCAATGCC
AAAAACCTTG CCCTGTCCTA TGCCTGCGGT GTGGGCGGTG GGCGTACCGG CATCATCGAA
ACCACCTTCA AGGATGAAAC CGAGACCGAC CTGTTCGGCG AGCAGGCTGT CCTGTGTGGC
GGCTGTGTGG AGCTGGTCAA GGCTGGTTTC GAAACCCTGG TCGAGGCTGG TTACGCGCCG
GAAATGGCCT ACTTCGAGTG TCTGCACGAA TTGAAGCTGA TCGTCGACCT CATGTTCGAG
GGCGGCATTG CCAACATGAA CTACTCGATC TCCAACAACG CCGAATACGG TGAGTACGTT
ACCGGTCCGG AGGTGATCAA CGAGCAATCC CGTCAGGCCA TGCGCAACGC CTTGAAGCGT
ATTCAGGATG GTGAGTACGC CAAGATGTTC ATTACCGAAG GCGCTGCCAA CTATCCGTCG
ATGACTGCCT ATCGTCGCAA CAATGCTGCG CATCAGATCG AGGTGGTCGG TGAGAAGCTG
CGTACCATGA TGCCCTGGAT CGCGGCCAAC AAGATCGTCG ACAAGACCAA GAACTAA
 
Protein sequence
MKVYYDKDCD LSIIQSKKVA IIGYGSQGHA HACNLKDSGV DVYVGLRAGS ASVAKAEAHG 
LTVKSVKDAV AAADVVMILT PDEFQGRLYK DEIEPNLKKG ATLAFAHGFS IHYNQVVPRA
DLDVIMIAPK APGHTVRSEF VRGGGIPDLI AVYQDASGNA KNLALSYACG VGGGRTGIIE
TTFKDETETD LFGEQAVLCG GCVELVKAGF ETLVEAGYAP EMAYFECLHE LKLIVDLMFE
GGIANMNYSI SNNAEYGEYV TGPEVINEQS RQAMRNALKR IQDGEYAKMF ITEGAANYPS
MTAYRRNNAA HQIEVVGEKL RTMMPWIAAN KIVDKTKN