Gene Avin_42460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42460 
SymbolpqiA 
ID7763122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp4274342 
End bp4274965 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content61% 
IMG OID643807097 
ProductParaquat-inducible protein A 
Protein accessionYP_002801345 
Protein GI226946272 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGCCA TTGATGCAGG CATTCTGGTC TGTCCCGAGT GCCATCAGCT CAACCGCCGC 
GAGGAGAACC ACGATGGGCT GCAATGCGTT CGCTGCGGCG CTCGGGTCCA TGCGCGCCAT 
CCGAACAGCC TGGGGCGTAC CTGGGCACTC CTGTTGACTG CCGCAATCCT GTACATCCCG 
GCCAATCTGC TGCCCATCAT GACCGTCAGC GCCCTTGGCA AGGGTGAGCC GGATACCATC 
ATGTCCGGTG TGGTCGCTCT GGTGCAAATG GGCTCCCTGC CCGTGGCGCT GGTAGTGTTC 
GTGGCGAGCA TTCTGGTGCC GACCTTCAAA CTGGTCGGTA TCGCCTTGCT GCTGATTTCC 
GTGCAGCGCC ACCAGGCGCT TTCCGCCCGC CAGCGCATCC TCATGTTCCG CTTCATCGAG 
TGGATCGGCC GCTGGTCGAT GCTGGATATT TTCGTCATCG CCACTCTGGT GGCCGTGGTC 
AACTTCGGCA CCCTGGCCAG GGTCGAGCCG AACCTGGGAG CCGTGGCCTT TGCCACTGTG 
GTGATTCTGA CCATGCTGGC GGCTACCACC TTCGATCCAC GTTTGATTTG GGACAACACG 
GAGTCCGACG ATGACCATGA ATGA
 
Protein sequence
MRAIDAGILV CPECHQLNRR EENHDGLQCV RCGARVHARH PNSLGRTWAL LLTAAILYIP 
ANLLPIMTVS ALGKGEPDTI MSGVVALVQM GSLPVALVVF VASILVPTFK LVGIALLLIS 
VQRHQALSAR QRILMFRFIE WIGRWSMLDI FVIATLVAVV NFGTLARVEP NLGAVAFATV 
VILTMLAATT FDPRLIWDNT ESDDDHE