Gene Avin_42400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42400 
SymbolotsB 
ID7763116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4267609 
End bp4268370 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID643807091 
Producttrehalose-phosphatase 
Protein accessionYP_002801339 
Protein GI226946266 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGTC AATGCCCCAC CTGTGCGCAG GACCTGCAAG GCTGCGCCTT CTTCTTCGAT 
GTGGACGGAA CGCTTGCCGA AATACAGCCC CGTCCCGAGC TGGTATTCAT CCCCGCCGCC
ATACTCGCCG CCCTTGGCCG GCTCCAGACC GTCGGAGTAC CGGTCGCCGT GATCTCCGGT
CGTCGGCTGG CGGATCTCGA TCAGTTGTTC GAGCCGCTGC GCCTGCCGGC CGCCGGCGTG
CACGGCGCCG AGCGCCGCGG CGCCGACGGC CGGCTGCGGC AACTGAACCT GGATCGGGAG
GCCCTGCGCC GGGTCGGGGA CGAACTGTTC CAGGCCTGCG CCCGGTACCC CGGGTTGCAT
CTGGAAAACA AGGGACTGGC CTTCGCGCTG CATTTCCGTC TGGCGCCCGA ACTGGAGGCG
GTCGCGCGCG GCCTGGCCGA GGACTTCATC CGCCGCTACC CCGCGCTGCT GACCCTGCAG
CCGGGCAAGT GCGTGTTCGA ACTCAAGCCG CGCGGCGCCA GCAAGGGGGA GGTGATCCGC
GAATTCATGC GCGAGCCGCC GTTCGGCGGC CGGGTGCCGG TATTCATCGG CGACGACCTC
ACCGACGAGG CCGGTTTCCA GGCGGTCAAC GCCCTGGGTG GGCATTCGTT CAAGGTAGGG
CCGGGCGAGA CGGCCGCTCG ACAGCGGCTG GACTCCGTCT CGGCGGTGGA AAAATGGCTG
GACGCTCTGG TCCGGCCCCT CAAACCGGAG GTTTATCCAT GA
 
Protein sequence
MNGQCPTCAQ DLQGCAFFFD VDGTLAEIQP RPELVFIPAA ILAALGRLQT VGVPVAVISG 
RRLADLDQLF EPLRLPAAGV HGAERRGADG RLRQLNLDRE ALRRVGDELF QACARYPGLH
LENKGLAFAL HFRLAPELEA VARGLAEDFI RRYPALLTLQ PGKCVFELKP RGASKGEVIR
EFMREPPFGG RVPVFIGDDL TDEAGFQAVN ALGGHSFKVG PGETAARQRL DSVSAVEKWL
DALVRPLKPE VYP