Gene Avin_42260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42260 
Symbol 
ID7763104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp4252233 
End bp4252829 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID643807079 
ProductTetR family regulatory protein 
Protein accessionYP_002801328 
Protein GI226946255 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAC GCCACCCCCT CACCCGCGAA GATTGGATCC GTGCATCCCA GCGCATGCTG 
GTCAAGGGCG GCATCGACTC GGTCCGGGTC GACACCCTGG CGAAGGAGCT GGACATCACC 
CGTGGCAGCT TCTACTACCA CTTCAAGAGT CGCGGCGAAC TGCTCGAAAG CATCCTCAGC 
GACTGGCGTG CCCGGGCGAC CGAGAGCGTC ATCCAGCAGT TGCGCAACAC CCGCAACAGC 
CCGCGGGAGC AGCTCCAGCG ACTGCTCGAA CTGCCCCTGC ACGGCAACAC CGCGCGCGAA 
GCGGCCTCCA CCGAGATCGG CATCCGCGGC TGGGCGCGCC GCGACCCGCA GGCGCGCCAA 
GCCATCGACG AGGTCGACAG TCACCGCCTG AGCTACATCG AAGGCCTGCT GATACAGCTC 
GGCTGCAACG AAACCGAAGC CCGCGACCGT GCCTGGCTGA TCTATGCCTA CCAGCAGAGC 
CTGTCCCAGG TGCAGGCCGG AGCCGACCCC GAGGAAAAGG CGCAACGCAG CGCCAGGCTC 
CTGGACATCC TGCTACCCCC TCCCCGGCCG GAACAGGAAA AGGACGGAAC CGCCTGA
 
Protein sequence
MSARHPLTRE DWIRASQRML VKGGIDSVRV DTLAKELDIT RGSFYYHFKS RGELLESILS 
DWRARATESV IQQLRNTRNS PREQLQRLLE LPLHGNTARE AASTEIGIRG WARRDPQARQ 
AIDEVDSHRL SYIEGLLIQL GCNETEARDR AWLIYAYQQS LSQVQAGADP EEKAQRSARL 
LDILLPPPRP EQEKDGTA