Gene Avin_42170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42170 
Symbol 
ID7763095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4246389 
End bp4247201 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content71% 
IMG OID643807070 
Product2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 
Protein accessionYP_002801319 
Protein GI226946246 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.541639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTGGC TCGATGGACA AGTGGCATTG GTGACCGGCG GTACCGGCGG CATCGGTTCG 
GCCATCGTCA GGCGCTATGT GGAGGAGGGC GCGCGGGTCG CGGTGATGGC CCGCGATCCC
GAGCAACTGC AGCGGCTCCG GGACGAACTG GGCGCGGCGG TGGTCACCGT GCGGGGCGAC
GTGACCAGCC TCGACGACAA CCGCCGGGCG GTCGACACCG CCCTGGCGGC CTTCGGCAGG
CTCGACACCT TCGTCGGCAA CGCGGCGGTG TTCGACTACT TCACCCGCCT CGAGCGGATC
GCCCCGGAGG AGCTGGAGAC GGCCTTCCAG CGCCTGTTCG CGGTCAACGT GCAGGGCTAC
CTGCTCGGCG CGCGCTGCTG CATCGACGCG CTGCGCGAGA CCCGCGGCAG CATGATCTTC
ACCCTGTCGA ACAGCGCCTT CTACGCCGGC GGCGGCGGGA TTCTCTACGT CACCGCCAAG
CATGCGCTGG TCGGCATGAT CCGCCAACTG GCCTACGAAC TGGCCCCGGA CATCCGTGTC
AACGGCGTGG CGCCGGGGGC GACCAACACG CCGATGAAAA GCCTGGAGGG GCTGAACGCG
CGCAGCGTGC CGCTCAACCG GATTCCCGGC TTCGAACAGG GCGCGGCGCA GGCGGTGCCG
CTCGGGCGCA TCGCCGAGCC GGAGGACCAT GCCGGCCATT ACGTGCTGCT CGCTTCGCGC
CGCGATTCCG GGCTGACCAC CGCCACCATC ATCCACAGCG ACGGCGGCTG GGAAATCCGC
AGCGCCGGGC CGCGCGCCCA CGCCAGGAGC TGA
 
Protein sequence
MGWLDGQVAL VTGGTGGIGS AIVRRYVEEG ARVAVMARDP EQLQRLRDEL GAAVVTVRGD 
VTSLDDNRRA VDTALAAFGR LDTFVGNAAV FDYFTRLERI APEELETAFQ RLFAVNVQGY
LLGARCCIDA LRETRGSMIF TLSNSAFYAG GGGILYVTAK HALVGMIRQL AYELAPDIRV
NGVAPGATNT PMKSLEGLNA RSVPLNRIPG FEQGAAQAVP LGRIAEPEDH AGHYVLLASR
RDSGLTTATI IHSDGGWEIR SAGPRAHARS