| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_42060 |
|---|
| Symbol | |
|---|
| ID | 7763084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4234366 |
|---|
| End bp | 4235253 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643807059 |
|---|
| Product | LysR family regulatory protein |
|---|
| Protein accession | YP_002801308 |
|---|
| Protein GI | 226946235 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCT TCCAGGCCAT GCAACTCTTC GCCCGCATCG TCGAACTCGG CAGCTTCAGC
AAGGCCGCCG AGCAGCAGGG CATGTCCCGT GCCTCGGCCA CCGCGCTCAT CAAGCAACTG
GAGAGCCGCC TCGGCGTGCG CCTCCTGCAG CGCACCACCC GGCAGGTCAG CGTCACCCTC
GACGGACGCT CCTACTACCA GCACTGCCGG TCGGTCCTCG GCGAGATCGA GGAAGTGGAA
AGCGTGCTGT CGCAGAATGC CCGGCACCCG CGCGGCCGCC TGAAGGTCGA CCTGCCGGCC
TCCCTCGGCC GCCTGGTGGT GATCCCGGCC CTGCCGGACT TCCAGGCGCG CTACCCGGAA
ATCGTCCTGG AAATCGGCAT CGGCGACCGG ATGATCGACC TGGTGCGCGA AGGCGTGGAC
TGCGTGGTGC GGATCGGCGG ACTGAGCGAC TCGACGCTGA TCGCCCGCAG CCTGCCGGCG
CTGCCCCAGG TGACCTGCGC CAGCGCCGGC TACCTGGCCC GCCACGGCCT GCCGACCAGC
CTCGACGAAC TGCAAGGACA CCGCTGCATC GACTACCTCT CGGCCACCAC CGGACGGCTG
GCGCCGCTGG AGTTCGCCGT CGACGGCCGC ATCGAGACCC GCAGCCTGCC GGCCAGCCTC
GCGGTCAACC ACGGCGAAGC CTACGTGGCC GCCTGCGAAG CGGGACTGGG CATCGTCCAG
GTGCCGCGCT ACCACGTCGA ACGCCAACTG GCCGCCGGCA GCCTGGTCGA ACTGCTGCCA
CAACACCCGC CGCCGGCGCT GCCGATGACG GTGCTCTATC CCCATCACCG GCACCTGACG
CCGCGTCTGC GGGTGTTCAT CGATTGGTTG GTGACGCTGT TCGGTTGA
|
|---|
| Protein sequence | MDRFQAMQLF ARIVELGSFS KAAEQQGMSR ASATALIKQL ESRLGVRLLQ RTTRQVSVTL
DGRSYYQHCR SVLGEIEEVE SVLSQNARHP RGRLKVDLPA SLGRLVVIPA LPDFQARYPE
IVLEIGIGDR MIDLVREGVD CVVRIGGLSD STLIARSLPA LPQVTCASAG YLARHGLPTS
LDELQGHRCI DYLSATTGRL APLEFAVDGR IETRSLPASL AVNHGEAYVA ACEAGLGIVQ
VPRYHVERQL AAGSLVELLP QHPPPALPMT VLYPHHRHLT PRLRVFIDWL VTLFG
|
|---|
| |