Gene Avin_41860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_41860 
Symbol 
ID7763065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4220240 
End bp4221100 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content63% 
IMG OID643807040 
ProductIntegrase, catalytic domain-containing protein 
Protein accessionYP_002801289 
Protein GI226946216 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTACG CCTTCATGCA AGCCCATACT CGGCAGTTTC CACTGAAGGT CATGTGCCGT 
GTGCTGGGCA TTGCCCGCAG CGGCTACTAC GCCTGGTGTT CGCGCACGCT CTCGAAGCGC
CGCCAGCAAC AGACCCAACT GGACCGCCTG GTAGCTCAGG CCTACCACGA GCGGAAGGGG
CGCAGCGGGG CTCCGCGGTT ATGCCTCGAC CTGAAGGCGT CGGGCCTGCC CTGCAATCGC
AAGACCGTGG CTGCTTCGAT GCGACGCCAG GGACTGCGGG CCAGGGCTGC CAGGAAGTTC
AAGGCCACCA CGAATTCCAG GCACTCACTA CCGGTGGCGG ACAACCTGCT CCGGCAGGAC
TTCACGGCAG CGGCGCCCAA CCGGAAGTGG GTGGGCGACA TGACTTACCT GCGTACGGAA
GAAGGCTGGT TGTATCTGGC CGTGATCATC GACCTGTACT CGCGCAGGGT GATCGGCTGG
GCCATGAACG AGCGCATGAC GGCCGAGCTG GCCTGCGATG CCCTGCGCAT GGCCCTGTGG
CGGCGCAAGC AGCCTCAAGG CGTGATCGTG CATACGGATC GAGGCAGCCA GTACTGTTCG
GCGGCCTATC GGGAACTGCT TCGTGCCCAT CGGCTGCGCG GCAGCATGAG CGCGAAGGGC
AATTGCTACG ACAACGCCTG TGCCGAAAGC TTCTTTCACA GTCTGAAGGT CGAGTGCATC
CATGGGGAAC GCTTCGGTAC GCATGCCCAG ATGCGTCAAA CCGTGTTCGA ATACATCGAA
ACCGACTACA ACCGCCAGCG TCGTCACAGC ACACTGGGAT ACATCAGTCC GGAAGCCTTC
GAGGCCCGGA TGCGTGCTTA A
 
Protein sequence
MKYAFMQAHT RQFPLKVMCR VLGIARSGYY AWCSRTLSKR RQQQTQLDRL VAQAYHERKG 
RSGAPRLCLD LKASGLPCNR KTVAASMRRQ GLRARAARKF KATTNSRHSL PVADNLLRQD
FTAAAPNRKW VGDMTYLRTE EGWLYLAVII DLYSRRVIGW AMNERMTAEL ACDALRMALW
RRKQPQGVIV HTDRGSQYCS AAYRELLRAH RLRGSMSAKG NCYDNACAES FFHSLKVECI
HGERFGTHAQ MRQTVFEYIE TDYNRQRRHS TLGYISPEAF EARMRA