Gene Avin_41660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_41660 
SymbolpqqC 
ID7763047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4199967 
End bp4200719 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID643807022 
Productpyrroloquinoline quinone biosynthesis protein PqqC 
Protein accessionYP_002801271 
Protein GI226946198 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID[TIGR02111] coenzyme PQQ biosynthesis protein C 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.177841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CAGCCATGAG TCCCGCCGAA TTCGAGCGGG CGTTGCGCGC CAAGGGCGCC 
TACTACCACA TCCACCATCC ATTCCAGGTC GCCATGTACG AGGGTCGCTC GACCCGCGAG
CAGATCCGGG GCTGGGTGGC CAATCGCTTC TACTACCAGG TGAACATTCC CCTGAAGGAC
GCGGCGATCC TCGCCAACTG CCCGGACCGC GAAGTCCGCC GCGAGTGGGT CCAGCGCATC
CTCGACCACG ATGGCGGCCC CGGCGAGGAG GGCGGCATCG AGGCCTGGCT GCGCCTCGGC
GAGGCGGTCG GCCTCGATCG CGAGCAATTG CTGTCCCAGG AACTGGTGCT GCCGGGGGTG
CGTTTCGCGG TGGACGCCTA CGTCAACTTC GCCCGCCGCG CCAGTTGGCA GGAGGCGGCC
GGCAGCTCGC TGACCGAACT GTTCGCCCCG ACCATCCACC AGTCGCGCCT GGACACCTGG
CCGCGGCACT ACCCCTGGAT CGAGGCCGGC GGCTACGACT ACTTCCGCAG GCGCCTGAAG
GAAGCGCGCC GCGACGTCGA GCACGGCCTG CGCATCACCC TCGCGCACTT CGCCACCCGC
GAGGCCCAGG CCCGCATGCT GGAGATCCTG CAGTTCAAGC TGGACATCCT CTGGAGCATG
CTCGACGCCA TGAGCATGGC CTACGAACTG GACCGTCCGC CGTATCACAC GGTGACCCAT
GAGCGGGTCT GGCACCGGGG AACGATACTG TGA
 
Protein sequence
MTQTAMSPAE FERALRAKGA YYHIHHPFQV AMYEGRSTRE QIRGWVANRF YYQVNIPLKD 
AAILANCPDR EVRREWVQRI LDHDGGPGEE GGIEAWLRLG EAVGLDREQL LSQELVLPGV
RFAVDAYVNF ARRASWQEAA GSSLTELFAP TIHQSRLDTW PRHYPWIEAG GYDYFRRRLK
EARRDVEHGL RITLAHFATR EAQARMLEIL QFKLDILWSM LDAMSMAYEL DRPPYHTVTH
ERVWHRGTIL