| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_41650 |
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| Symbol | pqqD |
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| ID | 7763046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4199558 |
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| End bp | 4199836 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643807021 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqD |
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| Protein accession | YP_002801270 |
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| Protein GI | 226946197 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.198613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA CCACCCTGAA CGATATCCCC CAATTGCGCC GCGGCTTCCG CTTCCAGTGG
GAGCCGGCGC AGAACTGCCA CGTGCTGCTC TATCCCGAGG GCATGGTCAA GCTCAACGAC
AGTGCCGCGG CGATCCTCGG TCAGGTCGAC GGGGACCGCA GCATCGCCGC CATCGTCGCC
GCGCTGCGCG AGCGCTTTCC CGAGAGCGAT GGCATCGAGG AGGACGTCCT GGAATTTCTG
GAGGTGGCGC GTGAGCGCTC CTGGATCGAG CTGCACTGA
|
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| Protein sequence | MSETTLNDIP QLRRGFRFQW EPAQNCHVLL YPEGMVKLND SAAAILGQVD GDRSIAAIVA
ALRERFPESD GIEEDVLEFL EVARERSWIE LH
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