Gene Avin_41540 details

Gene Information

• Locus tag: Avin_41540
• Symbol: pth
• ID: 7763036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4188491
• End bp: 4189075
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643807012
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_002801261
• Protein GI: 226946188
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCG TGCAACTGAT CGTCGGCCTG GGAAATCCCG GCCCGGAATA CGAACAGACC 
CGGCACAATG CAGGGGCCCT TTTCGTCGAG CGCGTGGCAT CCGCCAAGGG TGTCCGCCTC 
AGCGCCGACA AGAAGTATTT CGGCCTGGTC GGCAAGTTCA GCCATCAGGG CCGCGACGTT 
CGTCTGCTCA TCCCCACCAC CTACATGAAC CGCAGCGGCC AGTCCGTGGC GGCGCTGGCG 
AACTTCTTCC GCATCCCGCC GGCGGCCATC CTGGTGGCCC ACGACGAACT CGACATGCCC 
CCCGGCACCG CCAGGCTCAA GCAGGGCGGC GGCCATGGCG GGCACAACGG GCTACGCGAC 
ATCATCGCCC AGTTCGGCAA CCAGAACTCC TTCTATCGCC TGCGACTCGG CATCGGCCAT 
CCCGGCGACA AGAATCTCGT CTCCGGCTTC GTGCTCGGCC GGGCTCCGCG CAGCGAACAG 
GAAAAGCTCG AGGCCTGCAT CGACTTCGCC CTCGACGTGC TGCCGGACAT GCTCGACGGC 
AACTGGACCC GCGCCATGCA GCAGCTGCAC AGCAGGAAAG CCTGA 

 

Protein sequence

MTAVQLIVGL GNPGPEYEQT RHNAGALFVE RVASAKGVRL SADKKYFGLV GKFSHQGRDV 
RLLIPTTYMN RSGQSVAALA NFFRIPPAAI LVAHDELDMP PGTARLKQGG GHGGHNGLRD 
IIAQFGNQNS FYRLRLGIGH PGDKNLVSGF VLGRAPRSEQ EKLEACIDFA LDVLPDMLDG 
NWTRAMQQLH SRKA