Gene Avin_41500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_41500 
SymbollolB 
ID7763032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4185001 
End bp4185627 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID643807006 
Productouter membrane lipoprotein LolB 
Protein accessionYP_002801257 
Protein GI226946184 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID[TIGR00548] outer membrane lipoprotein LolB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.263625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCC CGTCTCTTCG CCACATCCTG CCGCTCGCCC TGCTCGCCCT GCTCGCCGGC 
TGCGCCGGCC TGACCTCCCG GGAAGCCCTC GAGGGCCAGG GCGATCCCGA CCGCTGGCGG
GCGCACAAGC GCGAGATCGG CACCCTCGAC GCCTGGCAGA TCAGCGGCAA GGTCGGCATC
AAGGCCCCTC GCGAATCCGC CAGCGGCACC CTGTTCTGGC TGCAACGCCA GGACTACTAC
GACATCCGCC TGTCCGGTCC GCTCGGCCGC GGCGCGACGC GCCTGACCGG GCGTCCCGGC
GGTATCGAAC TGGAGGTCGC CGGCCAGGGA CGCTATCGGG CCGAGTCGCC GGAAGCCCTG
CTCGAACAGC AACTCGGCTG GCGCCTGCCG GTTTCCCACC TGCTCTGGTG GGTACGCGGC
CTGCCGGCGC CCGGCAGCCG CAGCCAGCTC ACCCTCGACG GCGACAGCCA CCTGGCCCGG
CTGAGCCAGG ACGGCTGGCA GGTCGAATAC CAGCGCTACG TCGAACAGAA CGGTTTCTGG
CTGCCCGAAC GCCTGAAGCT GTACGGCCAG GACCTGGTCG TCACCCTGGT GATCAAGGAC
TGGCAACCGC GCCGGCTGGG ACTCTGA
 
Protein sequence
MSIPSLRHIL PLALLALLAG CAGLTSREAL EGQGDPDRWR AHKREIGTLD AWQISGKVGI 
KAPRESASGT LFWLQRQDYY DIRLSGPLGR GATRLTGRPG GIELEVAGQG RYRAESPEAL
LEQQLGWRLP VSHLLWWVRG LPAPGSRSQL TLDGDSHLAR LSQDGWQVEY QRYVEQNGFW
LPERLKLYGQ DLVVTLVIKD WQPRRLGL