Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_41500 |
Symbol | lolB |
ID | 7763032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4185001 |
End bp | 4185627 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643807006 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_002801257 |
Protein GI | 226946184 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.263625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCATCC CGTCTCTTCG CCACATCCTG CCGCTCGCCC TGCTCGCCCT GCTCGCCGGC TGCGCCGGCC TGACCTCCCG GGAAGCCCTC GAGGGCCAGG GCGATCCCGA CCGCTGGCGG GCGCACAAGC GCGAGATCGG CACCCTCGAC GCCTGGCAGA TCAGCGGCAA GGTCGGCATC AAGGCCCCTC GCGAATCCGC CAGCGGCACC CTGTTCTGGC TGCAACGCCA GGACTACTAC GACATCCGCC TGTCCGGTCC GCTCGGCCGC GGCGCGACGC GCCTGACCGG GCGTCCCGGC GGTATCGAAC TGGAGGTCGC CGGCCAGGGA CGCTATCGGG CCGAGTCGCC GGAAGCCCTG CTCGAACAGC AACTCGGCTG GCGCCTGCCG GTTTCCCACC TGCTCTGGTG GGTACGCGGC CTGCCGGCGC CCGGCAGCCG CAGCCAGCTC ACCCTCGACG GCGACAGCCA CCTGGCCCGG CTGAGCCAGG ACGGCTGGCA GGTCGAATAC CAGCGCTACG TCGAACAGAA CGGTTTCTGG CTGCCCGAAC GCCTGAAGCT GTACGGCCAG GACCTGGTCG TCACCCTGGT GATCAAGGAC TGGCAACCGC GCCGGCTGGG ACTCTGA
|
Protein sequence | MSIPSLRHIL PLALLALLAG CAGLTSREAL EGQGDPDRWR AHKREIGTLD AWQISGKVGI KAPRESASGT LFWLQRQDYY DIRLSGPLGR GATRLTGRPG GIELEVAGQG RYRAESPEAL LEQQLGWRLP VSHLLWWVRG LPAPGSRSQL TLDGDSHLAR LSQDGWQVEY QRYVEQNGFW LPERLKLYGQ DLVVTLVIKD WQPRRLGL
|
| |